mvp (version 1.0.1)

MVP.PCA: Principal Component Analysis

Description

Object: Principal Component Analysis

Usage

MVP.PCA (M, perc=1, pcs.keep=5, memo=NULL)

Arguments

M

Genotype in numeric format, pure 0, 1, 2 matrix; m * n, m is marker size, n is population size

perc

percentage of total SNPs selected for PCA

pcs.keep

maximum number of PCs

memo

a marker on output file name