.TXI_sc

Internal function to calculate TXI for expression data.

internal

Investigate the evolution of biological processes by capturing evolutionary signatures in transcriptomes (Drost et al. (2018) <doi:10.1093/bioinformatics/btx835>). This package aims to provide a transcriptome analysis environment to quantify the average evolutionary age of genes contributing to a transcriptome of interest.

Hajk-Georg Drost

myTAI

Evolutionary Transcriptomics

Stefan Manolache

Jaruwatana Sodai Lotharukpong

Nikola Kalábová

Filipa Martins Costa

Kristian K Ullrich

.TXI_sc function

<dl><dt>expression</dt>
<dd>Matrix of expression values, dgmatrix</dd>
<dt>strata_values</dt>
<dd>Numeric vector of phylostratum values</dd></dl>

Arguments

Calculate TXI for single cell expression sparse matrix. — .TXI_sc

<dl>

<dt>expression</dt>
<dd>Matrix of expression values, dgmatrix</dd>


<dt>strata_values</dt>
<dd>Numeric vector of phylostratum values</dd>

</dl>

.TXI_sc: Calculate TXI for single cell expression sparse matrix.

Description

Usage

Value

Arguments