Calculate the transcriptomic polymorphism index values for a PhyloExpressionSet.
This function provides backward compatibility with the old TPI() function.

Investigate the evolution of biological processes by capturing evolutionary signatures in transcriptomes (Drost et al. (2018) <doi:10.1093/bioinformatics/btx835>). This package aims to provide a transcriptome analysis environment to quantify the average evolutionary age of genes contributing to a transcriptome of interest.

Hajk-Georg Drost

myTAI

Evolutionary Transcriptomics

Stefan Manolache

Jaruwatana Sodai Lotharukpong

Nikola Kalábová

Filipa Martins Costa

Kristian K Ullrich

TPI function

<dl><dt>phyex_set</dt>
<dd>A PhyloExpressionSet object</dd></dl>

Arguments

Calculate Transcriptomic Polymorphism Index (TPI) — TPI

<dl>

<dt>phyex_set</dt>
<dd>A PhyloExpressionSet object</dd>

</dl>

TPI: Calculate Transcriptomic Polymorphism Index (TPI)

Description

Usage

Value

Arguments