collapse

Convert a PhyloExpressionSet with replicates to one with collapsed expression data.

Investigate the evolution of biological processes by capturing evolutionary signatures in transcriptomes (Drost et al. (2018) <doi:10.1093/bioinformatics/btx835>). This package aims to provide a transcriptome analysis environment to quantify the average evolutionary age of genes contributing to a transcriptome of interest.

Hajk-Georg Drost

myTAI

Evolutionary Transcriptomics

Stefan Manolache

Jaruwatana Sodai Lotharukpong

Nikola Kalábová

Filipa Martins Costa

Kristian K Ullrich

collapse function

<dl><dt>phyex_set</dt>
<dd>A PhyloExpressionSet object</dd>
<dt>...</dt>
<dd>Additional arguments passed to methods</dd></dl>

Arguments

Collapse PhyloExpressionSet Replicates — collapse

<dl>

<dt>phyex_set</dt>
<dd>A PhyloExpressionSet object</dd>


<dt>...</dt>
<dd>Additional arguments passed to methods</dd>

</dl>

collapse: Collapse PhyloExpressionSet Replicates

Description

Usage

Value

Arguments

Examples