Create a comprehensive plot showing GATAI convergence across multiple runs and thresholds.
full_gatai_convergence_plot(phyex_set, runs, p = 0.5, ps = c(0.25, 0.5, 0.75))A patchwork composition showing convergence analysis
A PhyloExpressionSet object
List of GATAI run results
Consensus threshold for petal plot (default: 0.5)
Vector of consensus thresholds for convergence plots (default: c(0.25, 0.5, 0.75))
This function creates a comprehensive visualization of GATAI convergence including consensus set sizes, p-values, threshold comparisons, and gene removal patterns across multiple runs. # Create full convergence plot # conv_plot <- full_gatai_convergence_plot(phyex_set, gatai_runs)