genes_lowly_expressed

Select genes with mean expression below a specified threshold.

Investigate the evolution of biological processes by capturing evolutionary signatures in transcriptomes (Drost et al. (2018) <doi:10.1093/bioinformatics/btx835>). This package aims to provide a transcriptome analysis environment to quantify the average evolutionary age of genes contributing to a transcriptome of interest.

Hajk-Georg Drost

myTAI

Evolutionary Transcriptomics

Stefan Manolache

Jaruwatana Sodai Lotharukpong

Nikola Kalábová

Filipa Martins Costa

Kristian K Ullrich

genes_lowly_expressed function

<dl><dt>phyex_set</dt>
<dd>A PhyloExpressionSet object</dd>
<dt>threshold</dt>
<dd>Mean expression threshold (default: 1)</dd></dl>

Arguments

Select Lowly Expressed Genes — genes_lowly_expressed

<dl>

<dt>phyex_set</dt>
<dd>A PhyloExpressionSet object</dd>


<dt>threshold</dt>
<dd>Mean expression threshold (default: 1)</dd>

</dl>

genes_lowly_expressed: Select Lowly Expressed Genes

Description

Usage

Value

Arguments

Details

Examples