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myTAI (version 2.3.4)

get_angles: Calculate Gene Expression Angles

Description

Calculate developmental stage angles for genes based on their expression patterns.

Usage

get_angles(e)

Value

Numeric vector of angles representing each gene's expression pattern

Arguments

e

Matrix of expression values with genes as rows and stages as columns

Details

This function uses PCA to project genes and ideal expression patterns into 2D space, then calculates the angle of each gene relative to ideal patterns. The angles represent the peak expression timing during development.