rel_exp_matrix

Computes relative expression profiles for all age categories in a PhyloExpressionSet.

Investigate the evolution of biological processes by capturing evolutionary signatures in transcriptomes (Drost et al. (2018) <doi:10.1093/bioinformatics/btx835>). This package aims to provide a transcriptome analysis environment to quantify the average evolutionary age of genes contributing to a transcriptome of interest.

Hajk-Georg Drost

myTAI

Evolutionary Transcriptomics

Stefan Manolache

Jaruwatana Sodai Lotharukpong

Nikola Kalábová

Filipa Martins Costa

Kristian K Ullrich

rel_exp_matrix function

<dl><dt>phyex_set</dt>
<dd>A PhyloExpressionSet object (BulkPhyloExpressionSet or ScPhyloExpressionSet).</dd></dl>

Arguments

Compute Relative Expression Matrix for PhyloExpressionSet — rel_exp_matrix

<dl>

<dt>phyex_set</dt>
<dd>A PhyloExpressionSet object (BulkPhyloExpressionSet or ScPhyloExpressionSet).</dd>

</dl>

rel_exp_matrix: Compute Relative Expression Matrix for PhyloExpressionSet

Description

Usage

Value

Arguments