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mzR (version 2.6.2)

parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass spectrometry data)

Description

mzR provides a unified API to the common file formats and parsers available for mass spectrometry data. It comes with a wrapper for the ISB random access parser for mass spectrometry mzXML, mzData and mzML files. The package contains the original code written by the ISB, and a subset of the proteowizard library for mzML and mzIdentML. The netCDF reading code has previously been used in XCMS.

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Version

Version

2.6.2

License

Artistic-2.0

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Maintainer

Bernd Fischer

Last Published

February 15th, 2017

Functions in mzR (2.6.2)

pwiz.version

Get the version number of pwiz backend.
metadata

Access the metadata from an mzR object.
mzR-class

Class mzR and sub-classes
peaks

Access the raw data from an mzR object.
openMSfile

Create and check mzR objects from netCDF, mzXML, mzData or mzML files.
mzR-package

parser for mzXML, mzData, mzML and mzid files (mass spectrometry data)