Calculate distances and dot products between two sets of neurons
calc_dists_dotprods(
query_neurons,
target_neurons,
subset = NULL,
ignoreSelf = TRUE,
...
)A list, one element for for pair of neurons with a 2 column data.frame containing one column of distances and another of absolute dot products.
a neuronlist to use for calculating
distances and dot products.
a further neuronlist to use for
calculating distances and dot products.
a data.frame specifying which neurons in
query_neurons and target_neurons should be compared, with
columns specifying query and target neurons by name, with one row for each
pair. If unspecified, this defaults to an all-by-all comparison.
a Boolean indicating whether to ignore comparisons of a
neuron against itself (default TRUE).
extra arguments to pass to NeuriteBlast.
Distances and dot products are the raw inputs for constructing scoring matrices for the NBLAST search algorithm.