read_netmhc2pan_xls_output

Read the output produced by MHC2pan,
which is an <code>XLS</code> file by default.

The field of immunology benefits from software that can
predict which peptide sequences trigger an immune response.
'NetMHCIIpan' is a such a tool: it predicts the
binding strength of a short peptide to a Major Histocompatibility
Complex class II (MHC-II) molecule.
'NetMHCIIpan' can be used from a web server at
<https://services.healthtech.dtu.dk/services/NetMHCIIpan-3.2/>
or from the command-line, using a local installation. This package
allows to call 'NetMHCIIpan' from R.

Richel Bilderbeek

netmhc2pan

Interface to 'NetMHCIIpan'

Richèl J.C. Bilderbeek

Lue Ping Zhao

Byungkuk Min

read_netmhc2pan_xls_output function

<dl><dt>xls_filename</dt>
<dd>name of an <code>xls</code> file</dd></dl>

Arguments

Read MHC2pan output — read_netmhc2pan_xls_output

<dl>

<dt>xls_filename</dt>
<dd>name of an <code>xls</code> file</dd>

</dl>

read_netmhc2pan_xls_output: Read MHC2pan output

Description

Usage

Value

Arguments

Examples