netresponse (version 1.32.2)

plot_subnet: plot_subnet

Description

Plot the given subnetwork.

Usage

plot_subnet(x, subnet.id, network, plot_names = TRUE, ...)

Arguments

x

Result from NetResponse (detect.responses function).

subnet.id

Subnet id.

network

Original network used in the modelling.

plot_names

Plot node names (TRUE) or indices (FALSE).

...

Further arguments for plot function.

Value

• Used for its side-effects. Returns a matrix that describes the investigated subnetwork.

References

L. Lahti et al.: Global modeling of transcriptional responses in interaction networks. Submitted.

Examples

#
# res <- detect.responses(D, netw, verbose = FALSE)
# net <- plot_subnet(res, subnet.idx = 1)