networktools (version 1.1.0)

plot.all.impact: Plot "all.impact" objects

Description

Convenience function for generating impact plots

Usage

# S3 method for all.impact
plot(x, order = c("given", "value", "alphabetical"),
  zscore = FALSE, abs_val = FALSE, ...)

Arguments

x

an output object from an impact function (class all.impact)

order

"alphabetical" orders nodes alphabetically, "value" orders nodes from highest to lowest impact value

zscore

logical. Converts raw impact statistics to z-scores for plotting

abs_val

logical. Plot absolute values of global strength impacts. If both abs_val=TRUE and zscore=TRUE, plots the absolute value of the z-scores.

...

other plotting specifications (ggplot2)

Details

Inputting an object of class global.impact or structure.impact will return a line plot that shows the relative impacts of each node. Inputting a all.impact object will return both of these plots simultaneously

Examples

# NOT RUN {
out <- impact(depression[,1:5])
plot(out)
# }
# NOT RUN {
out1 <- impact(depression)
plot(out1)
plot(out1, order="value", zscore=TRUE)
# }