plot_gns

Generates an overview plot of the neuroimaGene object according to each gene input.

neuroimaging

Contains functions to query and visualize the Neuroimaging features
associated with genetically regulated gene expression (GReX). The primary utility,
neuroimaGene(), relies on a list of user-defined genes and returns a table of
neuroimaging features (NIDPs) associated with each gene. This resource
is designed to assist in the interpretation of genome-wide and transcriptome-wide
association studies that evaluate brain related traits. Bledsoe (2024)
<doi:10.1016/j.ajhg.2024.06.002>. In addition there are several visualization
functions that generate summary plots and 2-dimensional visualizations of regional
brain measures. Mowinckel (2020).

Xavier Bledsoe

neuroimaGene

Transcriptomic Atlas of Neuroimaging Derived Phenotypes

Eric Gamazon

plot_gns function

<dl><dt>ng_obj</dt>
<dd>NeuroimaGene Object</dd>
<dt>maxGns</dt>
<dd>maximum number of genes to visualize. default=15</dd>
<dt>title</dt>
<dd>optional title tag for the plot</dd>
<dt>verbose</dt>
<dd>print runtime messages to R console. Default to FALSE</dd></dl>

Arguments

Gene summary plot of neuroimaGene object — plot_gns

<dl>

<dt>ng_obj</dt>
<dd>NeuroimaGene Object</dd>


<dt>maxGns</dt>
<dd>maximum number of genes to visualize. default=15</dd>


<dt>title</dt>
<dd>optional title tag for the plot</dd>


<dt>verbose</dt>
<dd>print runtime messages to R console. Default to FALSE</dd>

</dl>

plot_gns: Gene summary plot of neuroimaGene object

Description

Usage

Value

Arguments

Examples