load_mri_patient

This function loads the MRI scans from a patient. It assumes that the MRI
scans are contained in the same folder and refer to MRI modalities T1-weighted, T2-weighted and FLAIR.
Only the first MRI scan that matched the modalities keywords ('T1','T2' or 'FLAIR') will be kept.

Preprocessing pipeline for normalizing and cleaning T1-weighted, T2-weighted and FLAIR MRI images coming from different sources, diseases, patients, scanners and sites.

David Payares

neuronorm

Preprocessing of Structural MRI for Multiple Neurodegenerative
Diseases

Jorge Mateu

Wiebke Schick

Nicholas J. Tustison

Brian B Avants

Philip A. Cook

Yuanjie Zheng

Alexander Egan

Paul A. Yushkevich

James C. Gee

M. Grossman

Jean-Philippe Fortin

Elizabeth M. Sweeney

John Muschelli

Ciprian M. Crainiceanu

Russell T. Shinohara

Yongyue  Zhang

J. Michae Brady

Stephen Smith

load_mri_patient function

<dl><dt>folder</dt>
<dd>folder containing the MRI scans. The MRI scans should be in format NiFTI.</dd>
<dt>modalities</dt>
<dd>string or vector of strings with the MRI modalities to be considered. Should be at least one of T1, T2 or FLAIR. By default, all modalities are searched within the folder.</dd></dl>

Arguments

Load MRI scans per patient — load_mri_patient

<dl>

<dt>folder</dt>
<dd>folder containing the MRI scans. The MRI scans should be in format NiFTI.</dd>


<dt>modalities</dt>
<dd>string or vector of strings with the MRI modalities to be considered. Should be at least one of T1, T2 or FLAIR. By default, all modalities are searched within the folder.</dd>

</dl>

Load MRI scans per patient

load_mri_patient: Load MRI scans per patient

Description

Usage

Value

Arguments