normalized_plot

object

<p>Plot normalized cumulative distribution
<code>normalized_plot</code> Plots the (normalized) cumulative distribution of the data as well as the theoretical expectation from
a neutral evolutionary model.</p>

Package takes frequencies of mutations as reported by high throughput sequencing data from cancer and fits a theoretical neutral model of tumour evolution. Package outputs summary statistics and contains code for plotting the data and model fits. See Williams et al 2016 <doi:10.1038/ng.3489> and Williams et al 2017 <doi:10.1101/096305> for further details of the method.

Marc Williams

neutralitytestr

Test for a Neutral Evolutionary Model in Cancer Sequencing Data

normalized_plot function

Plot normalized cumulative distribution
<code>normalized_plot</code> Plots the (normalized) cumulative distribution of the data as well as the theoretical expectation from
a neutral evolutionary model. — normalized_plot

Plot normalized cumulative distribution
<code>normalized_plot</code> Plots the (normalized) cumulative distribution of the data as well as the theoretical expectation from
a neutral evolutionary model.

normalized_plot: Plot normalized cumulative distribution `normalized_plot` Plots the (normalized) cumulative distribution of the data as well as the theoretical expectation from a neutral evolutionary model.

Description

Usage

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Value

Examples