plot_all

object

<p>Plot all plots in the package and make composite figure.
<code>plot_all</code> Plots histogram, linear model best fit plot
and normalized plot and plot and makes composite figure.</p>

Package takes frequencies of mutations as reported by high throughput sequencing data from cancer and fits a theoretical neutral model of tumour evolution. Package outputs summary statistics and contains code for plotting the data and model fits. See Williams et al 2016 <doi:10.1038/ng.3489> and Williams et al 2017 <doi:10.1101/096305> for further details of the method.

Marc Williams

neutralitytestr

Test for a Neutral Evolutionary Model in Cancer Sequencing Data

plot_all function

Plot all plots in the package and make composite figure.
<code>plot_all</code> Plots histogram, linear model best fit plot
and normalized plot and plot and makes composite figure. — plot_all

Plot all plots in the package and make composite figure.
<code>plot_all</code> Plots histogram, linear model best fit plot
and normalized plot and plot and makes composite figure.

plot_all: Plot all plots in the package and make composite figure. `plot_all` Plots histogram, linear model best fit plot and normalized plot and plot and makes composite figure.

Description

Usage

Arguments

Value

Examples