newFocus
The DESCRIPTION file: newFocus newFocus For the GO (Gene Ontology) terms chosen as focus level nodes, newFocus function will return the minimum number of true discoveries. For GO terms that are non-focus level nodes, we use pick to count the number of true discoveries based on the result of newFocus.
Ningning Xu, Aldo solari, Jelle Goeman, Clsoed testing with global test, with applications on metabolomics data, arXiv:2001.01541, https://arxiv.org/abs/2001.01541
Jelle J. Goeman, Sara A. van de Geer, Floor de Kort, Hans C. van Houwelingen, A global test for groups of genes: testing association with a clinical outcome, Bioinformatics, Volume 20, Issue 1, 1 January 2004, Pages 93-99, https://doi.org/10.1093/bioinformatics/btg382