ncitations

A data.frame/tibble describing the number of times a particular gene is cited in the pubmed literature (date: 13-03-2018)

datasets

This package allows you the investigate intercellular communication from a computational perspective. More specifically, it allows to investigate how interacting cells influence each other's gene expression. Functionalities of this package (e.g. including predicting extracellular upstream regulators and their affected target genes) build upon a probabilistic model of ligand-target links that was inferred by data-integration.

Robin Browaeys

nichenetr

NicheNet: Modeling Intercellular Communication by Linking Ligands to Target Genes

ncitations function

A data frame/tibble<dl class="dl-horizontal">
 <dt>entrez</dt><dd>entrez</dd>
 <dt>ncitations</dt><dd>ncitations</dd>
 <dt>symbol</dt><dd>symbol</dd>
 <dt>entrez_mouse</dt><dd>entrez_mouse</dd>
 <dt>symbol_mouse</dt><dd>symbol_mouse</dd>
 </dl>

Format

Number of citations for genes — ncitations

A data frame/tibble<dl class='dl-horizontal'>
 <dt>entrez</dt><dd>entrez</dd>
 <dt>ncitations</dt><dd>ncitations</dd>
 <dt>symbol</dt><dd>symbol</dd>
 <dt>entrez_mouse</dt><dd>entrez_mouse</dd>
 <dt>symbol_mouse</dt><dd>symbol_mouse</dd>
 </dl>

ncitations: Number of citations for genes

Description

Usage

Arguments

Format