source_weights_df

A data.frame/tibble describing weight associated to each data source. These weights will be used for weighted aggregagion of source networks

datasets

This package allows you the investigate intercellular communication from a computational perspective. More specifically, it allows to investigate how interacting cells influence each other's gene expression. Functionalities of this package (e.g. including predicting extracellular upstream regulators and their affected target genes) build upon a probabilistic model of ligand-target links that was inferred by data-integration.

Robin Browaeys

nichenetr

NicheNet: Modeling Intercellular Communication by Linking Ligands to Target Genes

source_weights_df function

A data frame/tibble<dl class="dl-horizontal">
 <dt>source</dt><dd>name of data source</dd>
 <dt>weight</dt><dd>weight associated to a data source</dd>
 </dl>

Format

Data source weights — source_weights_df

A data frame/tibble<dl class='dl-horizontal'>
 <dt>source</dt><dd>name of data source</dd>
 <dt>weight</dt><dd>weight associated to a data source</dd>
 </dl>

source_weights_df: Data source weights

Description

Usage

Arguments

Format