nosoiSimOneConstructor

N.infected

table.hosts

table.state

<p>geographical structure (one of "none, "discrete" or "continuous")</p>

popStructure

<p>Creates a <code>nosoiSimOne</code> object.</p>

internal

The aim of 'nosoi' (pronounced no.si) is to provide a flexible agent-based stochastic transmission chain/epidemic simulator (Lequime et al. in prep). It is named after the daimones of plague, sickness and disease that escaped Pandora's jar in the Greek mythology. 'nosoi' is able to take into account the influence of multiple variable on the transmission process (e.g. dual-host systems (such as arboviruses), within-host viral dynamics, transportation, population structure), alone or taken together, to create complex but relatively intuitive epidemiological simulations.

Sebastian Lequime

nosoi

A Forward Agent-Based Transmission Chain Simulator

Paul Bastide

Simon Dellicour

Philippe Lemey

Guy Baele

nosoiSimOneConstructor function

nosoiSimOne Constructor — nosoiSimOneConstructor

nosoiSimOne Constructor

nosoiSimOneConstructor: nosoiSimOne Constructor

Description

Usage

Arguments

Value