drawBernouilli

<p>vector of size K, giving the probability that each encounter
leads to an infection.</p>

<p>For each encounter, simulate whether a new individual is infected.</p>

internal

The aim of 'nosoi' (pronounced no.si) is to provide a flexible agent-based stochastic transmission chain/epidemic simulator (Lequime et al. bioRxiv 2020.03.03.973107). It is named after the daimones of plague, sickness and disease that escaped Pandora's jar in the Greek mythology. 'nosoi' is able to take into account the influence of multiple variable on the transmission process (e.g. dual-host systems (such as arboviruses), within-host viral dynamics, transportation, population structure), alone or taken together, to create complex but relatively intuitive epidemiological simulations.

Sebastian Lequime

nosoi

A Forward Agent-Based Transmission Chain Simulator

Paul Bastide

Simon Dellicour

Philippe Lemey

Guy Baele

drawBernouilli function

Draw newly infected — drawBernouilli

Draw newly infected

drawBernouilli: Draw newly infected

Description

Usage

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