get_node

Find the node descending from the branch where the host lies at a given
 time on the transmission tree.

internal

The aim of 'nosoi' (pronounced no.si) is to provide a flexible agent-based stochastic transmission chain/epidemic simulator (Lequime et al. Methods in Ecology and Evolution 11:1002-1007). It is named after the daimones of plague, sickness and disease that escaped Pandora's jar in the Greek mythology. 'nosoi' is able to take into account the influence of multiple variable on the transmission process (e.g. dual-host systems (such as arboviruses), within-host viral dynamics, transportation, population structure), alone or taken together, to create complex but relatively intuitive epidemiological simulations.

Sebastian Lequime

nosoi

A Forward Agent-Based Transmission Chain Simulator

Paul Bastide

Simon Dellicour

Philippe Lemey

Guy Baele

Thijs Janzen

get_node function

<dl><dt>tdata</dt>
<dd>a tibble extracted from a <code>treedata</code> object.</dd>
<dt>host</dt>
<dd>host id</dd>
<dt>time</dt>
<dd>time at which to sample the host</dd></dl>

Arguments

Get Node — get_node

<dl>

<dt>tdata</dt>
<dd>a tibble extracted from a <code>treedata</code> object.</dd>


<dt>host</dt>
<dd>host id</dd>


<dt>time</dt>
<dd>time at which to sample the host</dd>

</dl>

get_node: Get Node

Description

Usage

Value

Arguments

See Also