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nparACT (version 0.8)

Non-Parametric Measures of Actigraphy Data

Description

Computes interdaily stability (IS), intradaily variability (IV) & the relative amplitude (RA) from actigraphy data as described in Blume et al. (2016) and van Someren et al. (1999) . Additionally, it also computes L5 (i.e. the 5 hours with lowest average actigraphy amplitude) and M10 (the 10 hours with highest average amplitude) as well as the respective start times. The flex versions will also compute the L-value for a user-defined number of minutes. IS describes the strength of coupling of a rhythm to supposedly stable zeitgebers. It varies between 0 (Gaussian Noise) and 1 for perfect IS. IV describes the fragmentation of a rhythm, i.e. the frequency and extent of transitions between rest and activity. It is near 0 for a perfect sine wave, about 2 for Gaussian noise and may be even higher when a definite ultradian period of about 2 hrs is present. RA is the relative amplitude of a rhythm. Note that to obtain reliable results, actigraphy data should cover a reasonable number of days.

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Version

Install

install.packages('nparACT')

Monthly Downloads

318

Version

0.8

License

GPL-2

Maintainer

Christine Blume

Last Published

December 20th, 2017

Functions in nparACT (0.8)

nparACT-package

Non-Parametric Measures of Actigraphy Data
nparACT_base_loop

Classic Nonparametric Actigraphy Measures for Multiple Actigraphy Files
nparACT_flex_loop

Extended Nonparametric Actigraphy Measures for Multiple Actigraphy Files
nparACT_ISIVfunctions

List of Functions Computing IS and IV Values
sleepstudy

Actigraphy Data from a Sleep Study
nparACT_RAfunctions

List of Functions Computing RA, L and M Values and the Respective Start Times
nparACT_auxfunctions1

List of Auxiliary Functions
nparACT_auxfunctions2

List of Auxiliary Functions
nparACT_base

Classic Nonparametric Actigraphy Measures for Single Actigraphy Files
nparACT_flex

Extended Nonparametric Actigraphy Measures for Single Actigraphy Files