fillBins

dataframe with <code>sex</code> and <code>age</code> columns

ageDist

integer vector of lower age boundaries; must be the same
length as <code>upperAges</code>

lowerAges

integer vector of upper age boundaries; must be the same
length as <code>lowerAges</code>

upperAges

fillBins Fill bins represented by list of two lists <code>males</code> and
<code>females</code>.

Provides genetic tools for colony management and is a derivation
of the work in Amanda Vinson and Michael J Raboin (2015)
<https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4671785/> "A Practical
Approach for Designing Breeding Groups to Maximize Genetic Diversity in a
Large Colony of Captive Rhesus Macaques ('Macaca' 'mulatto')".
It provides a 'Shiny' application with an exposed API.
The application supports five groups of functions:
(1) Quality control of studbooks contained in text files or 'Excel'
workbooks and of pedigrees within 'LabKey' Electronic Health Records
(EHR);
(2) Creation of pedigrees from a list of animals using the 'LabKey' EHR
integration;
(3) Creation and display of an age by sex pyramid plot of the living
animals within the designated pedigree;
(4) Generation of genetic value analysis reports; and
(5) Creation of potential breeding groups with and without proscribed sex
ratios and defined maximum kinships.

R. Mark Sharp

fillBins: fillBins Fill bins represented by list of two lists `males` and `females`.

Description

Usage

Arguments