nprcgenekeepr (version 1.0.8)

getDemographics: Get demographic data

Description

This is a thin wrapper around labkey.selectRows().

Usage

getDemographics(colSelect = NULL)

Value

A data.frame containing LabKey demographic data with the columns specified in the single parameter provided.

Arguments

colSelect

(optional) a vector of comma separated strings specifying which columns of a dataset or view to import

Examples

# \donttest{
## Needs a connection to a LabKey server
library(nprcgenekeepr)
siteInfo <- getSiteInfo()
colSet <- siteInfo$lkPedColumns
source <- " generated by getDemographics: "
pedSourceDf <- tryCatch(getDemographics(colSelect = colSet),
  warning = function(wCond) {
    cat(paste0("Warning", source, wCond),
      name = "nprcgenekeepr"
    )
    return(NULL)
  },
  error = function(eCond) {
    cat(paste0("Error", source, eCond),
      name = "nprcgenekeepr"
    )
    return(NULL)
  }
)
# }