Distance matrix for growth curves. Every element of the matrix is the Anderson-Darling statistic calculated between two series.
AD.dist (x, cod, index=2)
vector representing data from many samples defined with cod
cod
array that defines the data subdivision among sites
if index=1 samples are divided by their average value; if index=2 (default) samples are divided by their median value
index
AD.dist returns the distance matrix between growth-curves built with the Anderson-Darling statistic.
AD.dist
The Anderson-Darling statistic used here is the one defined in http://en.wikipedia.org/wiki/Anderson-Darling_test as \(A^2\).
traceWminim, roi.
traceWminim
roi
# NOT RUN { data(hydroSIMN) annualflows summary(annualflows) x <- annualflows["dato"][,] cod <- annualflows["cod"][,] # Ad.dist AD.dist(x,cod) # it takes some time # }
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