nucleosome_htseq:
Example reads from high-troughtput sequencing nucleosome positioning experiment
Description
Few reads from paired-ended MNase-seq experiment in S.cerevisiae where mononucleosomes were sequenced
Usage
data(nucleosome_htseq)
Format
RangedData with the range of the reads and a data column with the strand information.Source
Publication pendingDetails
This data is obtained from MNase digested nucleosomal DNA and sequenced with Illumina platform. Paired-ended reads where mapped to SacCer1 genome using Bowtie, and imported to R using the package ShortRead and paired ends where merged into a single range. Reads were sorted by chromosome and starting position and only a few reads from the starting positions of chromosome 1 are presented.