O2pls-class

Class "O2pls"
This class represents the Annotation information

classes

Provides functions to do 'O2PLS-DA' analysis for multiple omics data integration.
The algorithm came from "O2-PLS, a two-block (X±Y) latent variable regression (LVR) method with an integral OSC filter"
which published by Johan Trygg and Svante Wold at 2003 <doi:10.1002/cem.775>.
'O2PLS' is a bidirectional multivariate regression method that aims to separate the covariance between
two data sets (it was recently extended to multiple data sets) (Löfstedt and Trygg, 2011 <doi:10.1002/cem.1388>; Löfstedt et al., 2012 <doi:10.1016/j.aca.2013.06.026>)
from the systematic sources of variance being specific for each data set separately.

Kai Guo

o2plsda

Multiomics Data Integration

Junguk Hur

Eva Feldman

O2pls-class function

<dl>
<dt><code>X</code></dt>
<dd>a Numeric matrix (input)</dd></dl>
<dt><code>Y</code></dt>
<dd>a Numeric matrix (input)</dd>
<dt><code>params</code></dt>
<dd>paramaters ysed in o2pls analysis</dd>
<dt><code>results</code></dt>
<dd>list of o2pls results</dd>

Slots

Author

Class "O2pls"
This class represents the Annotation information — O2pls-class

<dl>
<dt><code>X</code></dt>
<dd>a Numeric matrix (input)</dd>


<dt><code>Y</code></dt>
<dd>a Numeric matrix (input)</dd>


<dt><code>params</code></dt>
<dd>paramaters ysed in o2pls analysis</dd>


<dt><code>results</code></dt>
<dd>list of o2pls results</dd>


</dl>

O2pls-class: Class "O2pls" This class represents the Annotation information

Description

Arguments

Slots

Author