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oXim (version 1.0.1)

Oxycline Index from Matrix Echograms

Description

Tools to get oxycline depth from echogram matrix using median-filter and 2D-convolution based algorithms.

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Version

Install

install.packages('oXim')

Monthly Downloads

11

Version

1.0.1

License

GPL (>= 2)

Maintainer

Wencheng LauMedrano

Last Published

August 17th, 2016

Functions in oXim (1.0.1)

plot.oxyclineData

Plot method for oxyclineData
print.echoData

Print method for echoData Objects.
defaultFilterSettings

Default set of filter parameters.
getOxyrange

Takes a matrix of echogram and calculate Oxycline.
print.summary.oxyclineData

Print method for summary.oxyclineData
summary.echoData

Summary method for echoData
readEchograms

Takes outputs from Echopen and generates a matrix to calculate Oxycline.
summary.oxyclineData

Summary method for oxyclineData Objects.
print.oxyclineData

Print method for oxyclineData Objects.
print.summary.echoData

Print method for summary.echoData
echogramPlot

Plot a matrix of a filtered echogram.
colPalette

Default color palette most using on acostic echograms.
oXim-package

Oxycline Index from Matrix Echograms
plot.echoData

Plot method for echoData Objects.