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occCite (version 0.6.0)

Querying and Managing Large Biodiversity Occurrence Datasets

Description

Facilitates the gathering of biodiversity occurrence data from disparate sources. Metadata is managed throughout the process to facilitate reporting and enhanced ability to repeat analyses.

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Version

Install

install.packages('occCite')

Monthly Downloads

496

Version

0.6.0

License

GPL-3

Maintainer

Hannah Owens

Last Published

June 16th, 2025

Functions in occCite (0.6.0)

taxonRectification

Taxon Rectification
studyTaxonList

Study Taxon List
occCiteData-class

occCite Data Class
myOccCiteObject

Results of an occCite search for *Protea cynaroides*
occQuery

Query from Taxon List
getBIENpoints

Download occurrence points from BIEN
getGBIFpoints

Download occurrences from GBIF
summary.occCiteData

Summary for occCite data objects
print.occCiteCitation

Print occCite citation object
occCiteMap

Generating a map of downloaded points
GBIFLoginManager

GBIF Login Manager
occCiteCitation-class

occCite Citation Class
occCitation

Occurrence Citations
GBIFLogin-class

GBIFLogin Data Class
prevGBIFdownload

Download previously-prepared GBIF data sets
plot.occCiteData

Plotting summary figures for occCite search results