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oce (version 1.5-0)

Analysis of Oceanographic Data

Description

Supports the analysis of Oceanographic data, including 'ADCP' measurements, measurements made with 'argo' floats, 'CTD' measurements, sectional data, sea-level time series, coastline and topographic data, etc. Provides specialized functions for calculating seawater properties such as potential temperature in either the 'UNESCO' or 'TEOS-10' equation of state. Produces graphical displays that conform to the conventions of the Oceanographic literature. This package is discussed extensively by Kelley (2018) "Oceanographic Analysis with R" .

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Version

Install

install.packages('oce')

Monthly Downloads

2,776

Version

1.5-0

License

GPL (>= 2)

Maintainer

Dan Kelley

Last Published

January 8th, 2022

Functions in oce (1.5-0)

argoGrid

Grid Argo float data
as.sealevel

Coerce Data Into a Sealevel Object
beamName

Get names of Acoustic-Doppler Beams
as.rsk

Coerce Data Into a Rsk Object
bcdToInteger

Decode BCD to integer
bound125

Calculate a rounded bound, rounded up to mantissa 1, 2, or 5
ODFListFromHeader

Create a list of ODF header metadata
ODF2oce

Create ODF object from the output of ODF::read_ODF().
adpEnsembleAverage

Ensemble Average an ADP Object in Time
bremen-class

Class to Store Bremen-formatted Data
cm-class

Class to Store Current Meter Data
byteToBinary

composite

Create a composite object by averaging across good data
computableWaterProperties

Available derived water properties
ctdFindProfiles

Find Profiles within a Tow-Yow CTD Record
ctdDecimate

Decimate a CTD profile
adpFlagPastBoundary

Flag adp Data Past Water Column Boundary
defaultFlags

Suggest a default flag vector for bad or suspicious data
initialize,ctd-method

Initialize storage for a ctd object
decodeTime

Oce Version of as.POSIXct
imagep

Plot an Image with a Color Palette
initializeFlags,oce-method

Create storage for a flag, and initialize values, for a oce object
initializeFlags

Create storage for a flag, and initialize values, for a oce object
landsatAdd

Add a Band to a landsat Object
landsat

Sample landsat Dataset
lisst

LISST Dataset
lobo-class

Class to Store LOBO Data
adv-class

Class to Store adv Data
adp_rdi.000

Sample adp (acoustic-doppler profiler) file in RDI format
amsr-class

Class to Store AMSR-2 Satellite Data
approx3d

Trilinear interpolation in a 3D array
applyMagneticDeclination

Earth magnetic declination
as.gps

Coerce data into a GPS dataset
as.ladp

Coerce data into an ladp object
amsr

An amsr dataset for waters near Nova Scotia
mapContour

Add Contours on a Existing map
mapCoordinateSystem

Draw a coordinate system
mapText

Add Text to a Map
mapTissot

Add Tissot Indicatrices to a Map
as.lisst

Coerce Data Into a LISST Object
as.lobo

Coerce Data into a Lobo Object
as.cm

Coerce data into a CM object
oce.contour

Oce Variant of contour
beamToXyz

Change ADV or ADP coordinate systems
as.windrose

Create a Windrose Object
as.coastline

Coerce Data into a Coastline Object
beamToXyzAdp

Convert ADP From Beam to XYZ Coordinates
oceColorsJet

Create colors similar to the Matlab Jet scheme
oceColorsOxygen

Create colors suitable for oxygen fields
oce.grid

Add a Grid to an Existing Oce Plot
as.xbt

Create an xbt object
binMean2D

Bin-average f=f(x,y)
download.amsr

Download and Cache an amsr File
binmapAdp

Bin-map an ADP object
coastline-class

Class to Store Coastline Data
coastlineBest

Find the Name of the Best Coastline Object
download.coastline

Download a coastline File
drawPalette

Draw a palette, leaving margins suitable for accompanying plot
echosounder-class

Class to Store Echosounder Data
firstFinite

Get first finite value in a vector or array, or NULL if none
geodXy

Convert From Geographical to Geodesic Coordinates
handleFlags,vector-method

Signal erroneous application to non-oce objects
findBottom

Find the Ocean Bottom in an Echosounder Object
cm

A Current Meter (cm) Object
geodXyInverse

Inverse Geodesic Calculation
cnvName2oceName

Infer variable name, units and scale from a Seabird (.cnv) header line
coriolis

Coriolis parameter on rotating earth
ctd-class

Class to Store CTD (or general hydrographic) Data
lon360

Alter longitudes from -180:180 to 0:360 convention
lonlat2utm

Convert Longitude and Latitude to UTM
handleFlags

Handle flags in oce objects
initializeFlagsInternal

Create storage for a flag, and initialize values, for a oce object
julianDay

Convert a time to a Julian day
integerToAscii

Decode integer to corresponding ASCII code
labelWithUnit

Create label with unit
lonFormat

Format a longitude
lookWithin

Look Within the First Element of a List for Replacement Values
curl

Curl of 2D vector field
formatCI

Confidence interval in parenthetic notation
decodeHeaderNortek

Decode a Nortek Header
decimate

Smooth and Decimate, or Subsample, an Oce Object
d200321-001.ctd

Sample ctd dataset in .ctd format
enuToOther

Rotate acoustic-Doppler data to a new coordinate system
formatPosition

Format Geographical Position in Degrees and Minutes
enuToOtherAdp

Convert ADP ENU to Rotated Coordinate
handleFlags,argo-method

Handle Flags in ARGO Objects
handleFlags,ctd-method

Handle Flags in ctd Objects
oceDebug

Print a debugging message
oceDeleteData

Delete Something in an oce data Slot
mapLines

Add Lines to a Map
mapImage

Add an Image to a Map
GMTOffsetFromTz

Determine time offset from timezone
as.argo

Coerce Data Into an Argo Dataset
CTD_BCD2014666_008_1_DN.ODF.gz

Sample ctd dataset in odf format
as.adp

Create an ADP Object
plot,amsr-method

Plot an amsr Object
plot,adv-method

Plot an adv Object
plot,cm-method

Plot a cm Object
plot,coastline-method

Plot a coastline Object
ODFNames2oceNames

Translate ODF CODE strings to Oce Variable Names
T68fromT90

Convert from ITS-90 to IPTS-68 temperature
adp-class

Class to Store adp (ADCP) Data
argShow

Show an argument to a function, e.g. for debugging
addSpine

Add a spine to a section object
as.oce

Coerce Something Into an Oce Object
as.met

Coerce Data into met Object
binApply1D

Apply a function to vector data
binApply2D

Apply a function to matrix data
plot,oce-method

Plot an oce Object
plot,odf-method

Plot an odf Object
matchBytes

Locate byte sequences in a raw vector
argo-class

Class to Store Argo Data
preferAdjusted

Set Preference for Adjusted Values
as.ctd

Coerce data into CTD object
as.echosounder

Coerce Data into an Echosounder Object
as.topo

Coerce Data into Topo Object
as.unit

Convert a String to a Unit
handleFlagsInternal

Low-level function for handling data-quality flags
oce-deprecated

Deprecated and Defunct Elements of the oce package
matrixShiftLongitude

Rearrange areal matrix so Greenwich is near the centre
oce

oce: A Package for Oceanographic Analysis.
oceCRS

Coordinate Reference System strings for some oceans
head.oce

Extract The Start of an Oce Object
initializeFlags,adp-method

Create storage for a flag, and initialize values, for a adp object
coastlineWorld

World Coastline
coastlineCut

Cut a Coastline Object at Specified Longitude
initializeFlagSchemeInternal

Establish a data-quality scheme for a oce object
presentTime

Get the present time, in a stated timezone
beamUnspreadAdp

Adjust ADP Signal for Spherical Spreading
bilinearInterp

Bilinear Interpolation Within a Grid
binCount2D

Bin-count matrix data
prettyPosition

Pretty lat/lon in deg, min, sec
concatenate,oce-method

Concatenate oce objects
colormap

Calculate color map
binMean1D

Bin-average f=f(x)
colormapGMT

Create a GMT-type (CPT) colormap
concatenate

Concatenate oce objects
lobo

Sample LOBO Dataset
processingLog<-

Add an item to a processing log (in place)
read.adv.sontek.text

Read an ADV data file
ctdRaw

Seawater CTD Profile, Without Trimming of Extraneous Data
mapPolygon

Add a Polygon to a Map
matrixSmooth

Smooth a Matrix
mapScalebar

Add a Scalebar to a Map
locationForGsw

Reform longitude and latitude for use in gsw computations.
read.bremen

Read a Bremen File
read.amsr

Read an amsr File
read.cm

Read a CM file
read.odf

Read an ODF file
composite,amsr-method

Create a composite of amsr satellite data
met-class

Class to Store Meteorological Data
ctdRepair

Repair a malformed ctd object
d201211_0011.cnv

Sample ctd dataset in .cnv format
drawDirectionField

Draw a Direction Field
dataLabel

Try to associate data names with units, for use by summary()
fullFilename

Full name of file, including path
drawIsopycnals

Add Isopycnal Curves to TS Plot
oce-class

Base Class for oce Objects
numberAsPOSIXct

Convert a Numeric Time to a POSIXct Time
oceColorsClosure

Create color functions
oceColors9B

Create colors in a red-yellow-blue color scheme
read.rsk

Read a Rsk file
oceColorsDensity

Create colors suitable for density fields
oceColorsTemperature

Create colors suitable for temperature fields
oceGetMetadata

Get Something From an oce metadata Slot
oceDeleteMetadata

Delete Something in an oce metadata Slot
plot,argo-method

Plot an argo Object
oceColorsPAR

Create colors suitable for PAR fields
oceMagic

Find the Type of an Oceanographic Data File
oceEdit

Edit an Oce Object
oceColorsPalette

Create a vector of colors
plot,bremen-method

Plot a bremen Object
oceColorsTurbidity

Create colors suitable for turbidity fields
read.xbt.edf

Read a Sippican '.edf' format xbt file
read.xbt

Read an xbt file
sealevel-class

Class to Store Sealevel Data
sectionSort

Sort a Section
satellite-class

Class to Store Satellite Data
standardizeLongitude

Put longitude in the range from -180 to 180
[[,g1sst-method

Extract Something From a G1SST Object
setFlags,adp-method

Set data-quality flags within a adp object
[[,adp-method

Extract Something from an adp Object
plot,ctd-method

Plot a ctd Object
[[,gps-method

Extract Something From a GPS Object
oceColorsVorticity

Create colors suitable for vorticity fields
plot,rsk-method

Plot a rsk Object
plot,echosounder-method

Plot an echosounder Object
plot,satellite-method

Plot a satellite Object
[[,met-method

Extract Something From a met Object
processingLogAppend

Append an item to a processing log
processingLogItem

Create an item that can be inserted into a processing log
plotTS

Plot Temperature-Salinity Diagram
plotSticks

Draw a Stick Plot
composite,list-method

Composite by Averaging Across Data
ctd

A CTD profile in Halifax Harbour
oceConvolve

Convolve two time series
plot,adp-method

Plot an adp Object
oceSmooth

Smooth an Oce Object
plot,tidem-method

Plot a tidem Object
oceSetMetadata

Set Something in an oce metadata Slot
parseLatLon

Parse a Latitude or Longitude String
ctd.cnv

Sample ctd dataset in .cnv format
plotTaylor

Plot a Model-data Comparison Diagram
read.adv.sontek.adr

Read an ADV data file
predict.tidem

Predict a Tidal Signal
plot,topo-method

Plot a topo Object
[[,oce-method

Extract Something From an oce Object
g1sst-class

Class to Store G1SST Satellite-model Data
read.adv.sontek.serial

Read an ADV data file
eclipticalToEquatorial

Convert ecliptical to equatorial coordinate
echosounder

Echosounder Dataset
gravity

Acceleration due to earth gravity
[[<-,adp-method

Replace Parts of an ADP Object
read.coastline.openstreetmap

Read a Coastline File in Openstreetmap Format
read.coastline

Read a Coastline File
initializeFlagScheme,ctd-method

Establish a data-quality scheme for a ctd object
integrateTrapezoid

Trapezoidal Integration
handleFlags,adp-method

Handle Flags in adp Objects
initializeFlagScheme,oce-method

Establish a data-quality scheme for a oce object
[[<-,lisst-method

Replace Parts of a LISST Object
[[<-,adv-method

Replace Parts of an ADV Object
[[<-,landsat-method

Replace Parts of a landsat Object
interpBarnes

Grid data using Barnes algorithm
[[<-,topo-method

Replace Parts of a Topo Object
[[<-,windrose-method

Replace Parts of a Windrose Object
enuToOtherAdv

Convert ENU to Other Coordinate
abbreviateTimeLabels

Abbreviate a vector of times by removing commonalities
landsatTrim

Trim a landsat Image to a Geographical Region
rangeExtended

Calculate Range, Extended a Little, as is Done for Axes
read.ctd.odf

Read a CTD file in ODF format
read.sealevel

Read a Sealevel File
read.ctd.itp

Read an ITP-type CTD File
rangeLimit

Substitute NA for data outside a range
geodDist

Compute Geodesic Distance on Surface of Earth
equatorialToLocalHorizontal

Convert equatorial to local horizontal coordinate
geodGc

Great-circle Segments Between Points on Earth
subset,ctd-method

Subset a ctd Object
subset,coastline-method

Subset a Coastline Object
subtractBottomVelocity

Subtract Bottom Velocity from ADP
summary,adp-method

Summarize an ADP Object
initializeFlagScheme

Establish a data-quality scheme for a oce object
initializeFlagScheme,section-method

Establish a data-quality scheme for a section object
ladp-class

Class to Store Lowered-adp Data
swBeta

Seawater haline contraction coefficient
swAlphaOverBeta

Ratio of seawater thermal expansion coefficient to haline contraction coefficient
summary,topo-method

Summarize A Topo Object
summary,tidem-method

Summarize a Tidem Object
swLapseRate

Seawater lapse rate
swN2

Squared buoyancy frequency for seawater
read.adp.nortek

Read a Nortek ADP File
read.adp.rdi

Read a Teledyne/RDI ADP File
ad2cpHeaderValue

Decode an item from a Nortek AD2CP file header
latFormat

Format a latitude
adp

Sample adp (acoustic-doppler profiler) dataset
landsat-class

Class to Store landsat Data
latlonFormat

Format a latitude-longitude pair
longitudeTighten

Try to Reduce Section Longitude Range
read.aquadopp

Read a Nortek Aquadopp File
read.aquadoppHR

Read Nortek Aquadopp-HR File
secondsToCtime

Time interval as colon-separated string
setFlags

Set data-quality flags within a oce object
adpConvertRawToNumeric

Convert Raw to Numeric Values For adp Objects
retime

Adjust the time within Oce object
rotateAboutZ

Rotate velocity components within an oce object
section-class

Class to Store Hydrographic Section Data
read.section

Read a Section File
read.echosounder

Read an Echosounder File
lonlat2map

Convert Longitude and Latitude to X and Y
mapLongitudeLatitudeXY

Convert From Longitude and Latitude to X and Y
oce.axis.POSIXct

Oce Version of axis.POSIXct
magneticField

Earth magnetic declination, inclination, and intensity
metNames2oceNames

Convert met Data Name to Oce Name
mapLocator

Locate Points on a Map
oce.as.raw

Version of as.raw() that clips data
oceColorsCDOM

Create colors suitable for CDOM fields
lowpass

Perform lowpass digital filtering
met

Sample met Object
lisst-class

Class to Store LISST Data
shiftLongitude

Shift Longitude to Range -180 to 180
oceColorsPhase

Create colors suitable for phase fields
oceColorsChlorophyll

Create colors suitable for chlorophyll fields
oceRenameMetadata

Rename Something in an oce metadata Slot
oceColorsVelocity

Create colors suitable for velocity fields
oceColorsViridis

Create colors similar to the matlab Viridis scheme
oceColorsSalinity

Create colors suitable for salinity fields
oceSetData

Set Something in an oce data Slot
read.lobo

Read a LOBO File
read.g1sst

Read a G1SST file
swSpecificHeat

Seawater specific heat
plot,gps-method

Plot a gps Object
[[,bremen-method

Extract Something From a Bremen Object
[[,section-method

Extract Something From a Section Object
[[,argo-method

Extract Something From an Argo Object
[[,sealevel-method

Extract Something From a Sealevel Object
makeFilter

Make a digital filter
mapPlot

Draw a Map
mapPoints

Add Points to a Map
map2lonlat

Convert X and Y to Longitude and Latitude
oceColorsFreesurface

Create colors suitable for freesurface fields
angle2hms

Convert astronomical angle in degrees to hours, minutes and seconds
angleRemap

Convert angles from 0:360 to -180:180
oceColorsGebco

Create colors in a Gebco-like scheme
ocePmatch

Partial matching of strings or numbers
oceNames2whpNames

Translate Oce Data Names to WHP Data Names
swSpice

Seawater spiciness
rescale

Rescale values to lie in a given range
sealevel

Sealevel data for Halifax Harbour
read.met

Read a met File
resizableLabel

Provide axis names in adjustable sizes
sealevelTuktoyaktuk

Sea-level data set acquired in 1975 at Tuktoyaktuk
argoJuldToTime

Convert Argo Julian Day (juld) to time
[[<-,bremen-method

Replace Parts of a Bremen Object
tidalCurrent

Tidal Current Dataset
swThermalConductivity

Seawater thermal conductivity
swTSrho

Seawater temperature from salinity and density
section

Hydrographic section
unwrapAngle

Unwrap an angle that suffers modulo-360 problems
toEnuAdp

Convert an ADP Object to ENU Coordinates
useHeading

Replace the Heading for One Instrument With That of Another
tidedata

Tidal Constituent Information
toEnuAdv

Convert an ADV Object to ENU Coordinates
sectionAddStation

Add a CTD Station to a Section
as.section

Create a Section
argoNames2oceNames

Convert Argo Data Name to Oce Name
as.tidem

Create tidem object from fitted harmonic data
[[,ctd-method

Extract Something From a ctd Object
oceSpectrum

Wrapper to give normalized spectrum
beamToXyzAdpAD2CP

Convert AD2CP-style adp data From Beam to XYZ Coordinates
oceUnits2whpUnits

Translate oce unit to WHP unit
plot,ladp-method

Plot an ladp Object
plotProfile

Plot a CTD Profile
plotScan

Plot CTD data in a Low-Level Fashion
xbt

An XBT Object
[[<-,echosounder-method

Replace Parts of an Echosounder Object
[[<-,cm-method

Replace Parts of a CM Object
[[<-,g1sst-method

Replace Parts of a G1SST Object
subset,adv-method

Subset an ADV Object
[[,echosounder-method

Extract Something from an Echosounder Object
xbt.edf

Sample xbt dataset
beamToXyzAdv

Convert ADV from Beam to XYZ Coordinates
plot,met-method

Plot a met Object
plot,windrose-method

Plot a windrose Object
plot,lobo-method

Plot a lobo object
plotInset

Plot an Inset Diagram
processingLogShow

Show the processing log of an oce object
plot,xbt-method

Plot an xbt Object
plotPolar

Draw a Polar Plot
pwelch

Welch periodogram
read.adp.sontek

Read a Sontek ADP File
binAverage

Bin-average a vector y, based on x values
read.adp.sontek.serial

Read a serial Sontek ADP file
subset,amsr-method

Subset an amsr Object
subset,met-method

Subset a met Object
binCount1D

Bin-count vector data
xyzToEnu

Convert Acoustic-Doppler Data From xyz to enu Coordinates
xyzToEnuAdp

Convert ADP From XYZ to ENU Coordinates
read.ctd.odv

Read an ODV-type CTD File
rsk-class

Class to Store Rsk Data
rsk

Sample Rsk Dataset
read.ctd.sbe

Read a Seabird CTD File
[[,lisst-method

Extract Something From a LISST Object
sectionGrid

Grid a Section in Pressure Space
subset,topo-method

Subset a Topo Object
subset,oce-method

Subset an oce Object
concatenate,adp-method

Concatenate adp objects
concatenate,list-method

Concatenate a list of oce objects
[[,lobo-method

Extract Something From a LOBO Object
[[,xbt-method

Extract Something From an xbt Object
[[<-,oce-method

Replace Parts of an Oce Object
[[,windrose-method

Extract Something From a Windrose Object
ctdTrim

Trim Beginning and Ending of a CTD cast
[[<-,rsk-method

Replace Parts of a Rsk Object
[[<-,odf-method

Replace Parts of an ODF Object
despike

Remove spikes from a time series
ctimeToSeconds

Interpret a character string as a time interval
detrend

Detrend a set of observations
sectionSmooth

Smooth a Section
subset,xbt-method

Subset an xbt Object
summary,gps-method

Summarize a GPS Object
read.aquadoppProfiler

Read a Nortek Aquadopp-Profiler File
summary,windrose-method

Summarize a windrose object
summary,ladp-method

Summarize an ladp object
windrose-class

Class to Store Windrose Data
summary,xbt-method

Summarize an xbt Object
tidem-class

Class to Store Tidal Models
swDepth

Water depth
swSoundSpeed

Seawater sound speed
[[,amsr-method

Extract Something From an amsr Object
[[,ladp-method

Extract Something From an ladp Object
[[,adv-method

Extract Something from an adv Object
read.argo

Read an Argo Data File
[[<-,amsr-method

Replace Parts of an amsr Object
[[<-,gps-method

Replace Parts of a GPS Object
[[,landsat-method

Extract Something From a landsat Object
[[<-,argo-method

Replace Parts of an Argo Object
[[<-,ladp-method

title Replace Parts of a ladp Object
swDynamicHeight

Dynamic height of seawater profile
summary,met-method

Summarize a met Object
summary,lobo-method

Summarize a LOBO Object
summary,oce-method

Summarize an oce Object
read.ctd.woce

Read a WOCE-exchange CTD File
summary,odf-method

Summarize an ODF Object
read.ctd.woce.other

Read a WOCE-exchange EXPOCODE File
read.landsat

Read a landsat File Directory
download.met

Download and Cache a met File
swRrho

Density ratio
swSoundAbsorption

Seawater sound absorption in dB/m
read.lisst

Read a LISST File
renameData

Rename items in the data slot of an oce object (defunct)
read.xbt.noaa1

Read a NOAA format for AXBTs
swCSTp

Electrical conductivity ratio from salinity, temperature and pressure
swConservativeTemperature

Seawater conservative temperature, in GSW formulation
swSCTp

Practical salinity from electrical conductivity, temperature and pressure
swPressure

Water pressure
swRho

Seawater density
rskToc

Decode table-of-contents File from a Rsk File
window.oce

Window an Oce Object by Time or Distance
tidem

Fit a Tidal Model to a Timeseries
trimString

Remove leading and trailing whitespace from strings
topoWorld

Global Topographic Dataset at Half-degree Resolution
runlm

Calculate running linear models
setFlags,oce-method

Set data-quality flags within a oce object
setFlags,ctd-method

Set data-quality flags within a ctd object
snakeToCamel

Convert each of a vector of strings from SNAKE_CASE to camelCase
[[<-,sealevel-method

Replace Parts of a Sealevel Object
download.topo

Download and Cache a topo File
swSigmaT

Seawater quasi-potential density anomaly
fillGap

Fill a gap in an oce object
errorbars

Draw error bars on an existing xy diagram
gps-class

Class to Store GPS Data
ungrid

Extract (x, y, z) from (x, y, grid)
unduplicateNames

Rename duplicated character strings
swSigmaTheta

Seawater potential density anomaly
swSstar

Seawater Preformed Salinity, in GSW formulation
test_met_xml2.xml

Sample met dataset (XML format as of October 2019)
swTFreeze

Seawater freezing temperature
threenum

Calculate min, mean, and max values
grad

Calculate Matrix Gradient
handleFlags,oce-method

Handle flags in oce objects
standardDepths

Standard Oceanographic Depths
subset,odf-method

Subset an ODF object
[[,cm-method

Extract Something From a cm Object
summary,argo-method

Summarize an Argo Object
subset,rsk-method

Subset a Rsk Object
summary,bremen-method

Summarize a Bremen Object
summary,landsat-method

Summarize a landsat Object
summary,lisst-method

Summarize a LISST Object
handleFlags,section-method

Handle flags in Section Objects
summary,sealevel-method

Summarize a Sealevel Object
is.ad2cp

Test whether object is an AD2CP type
summary,section-method

Summarize a Section Object
swAbsoluteSalinity

Seawater absolute salinity, in GSW formulation
swAlpha

Seawater thermal expansion coefficient
julianCenturyAnomaly

Julian-Day number to Julian century
mapDirectionField

Add a Direction Field to an Existing Map
mapArrows

Add Arrows to a Map
mapGrid

Add a Longitude and Latitude Grid to an Existing Map
mapAxis

Add Axis Labels to an Existing Map
[[,coastline-method

Extract Something From a Coastline Object
[[,tidem-method

Extract Something From a tidem Object
unabbreviateYear

Determine year from various abbreviations
moonAngle

Lunar Angle as Function of Space and Time
undriftTime

Correct for drift in instrument clock
numberAsHMS

Convert a Numeric Time to Hour, Minute, and Second
[[,topo-method

Extract Something From a Topo Object
swZ

Vertical coordinate
[[<-,section-method

Replace Parts of a Section Object
[[<-,tidem-method

Replace Parts of a Tidem Object
[[<-,lobo-method

Replace Parts of a LOBO Object
subset,echosounder-method

Subset an Echosounder Object
[[<-,met-method

Replace Parts of a met Object
usrLonLat

Calculate lon-lat coordinates of plot-box trace
summary,adv-method

Summarize an ADV object
subset,lobo-method

Subset a LOBO Object
summary,cm-method

Summarize a CM Object
summary,amsr-method

Summarize an amsr Object
utm2lonlat

Convert UTM to Longitude and Latitude
oce.plot.ts

Oce Variant of plot.ts
woceNames2oceNames

Translate WOCE Data Names to Oce Data Names
oce.write.table

Write the Data Portion of Object to a File
oceApprox

Interpolate 1D Data with UNESCO or Reiniger-Ross Algorithm
oceAxis

Draw an axis, possibly with decade-style logarithmic scaling
woceUnit2oceUnit

Translate WOCE units to oce units
oceFilter

Filter a Time Series
oceColorsTwo

Create two-color palette
oceColorsTurbo

Create colors similar to the google turbo scheme
tail.oce

Extract the End of an Oce Object
summary,coastline-method

Summarize a Coastline Object
oceProject

Wrapper to sf::sf_project()
oceRenameData

Rename Something in an oce data Slot
oceGetData

Get Something from an oce data Slot
summary,rsk-method

Summarize a Rsk Object
tidemVuf

Nodal Modulation Calculations for Tidem
ocecolors

Data that define some color palettes
plot,landsat-method

Plot a landsat Object
odf-class

Class to Store ODF Data
summary,satellite-method

Summarize a satellite object
plot,sealevel-method

Plot a sealevel Object
plot,lisst-method

Plot a lisst Object
swSR

Seawater Reference Salinity, in GSW formulation
timeToArgoJuld

Convert time to Argo Julian Day (juld)
plot,section-method

Plot a section Object
unitFromString

Decode units, from strings
swSigma3

Seawater potential density anomaly referenced to 3000db pressure
swTheta

Seawater potential temperature
swViscosity

Seawater viscosity
swSTrho

Seawater salinity from temperature and density
swSigma4

Seawater potential density anomaly referenced to 4000db pressure
unitFromStringRsk

Infer Rsk units from a vector of strings
wind

Wind dataset
webtide

Get a Tidal Prediction from a WebTide Database
read.adp.ad2cp

Read an AD2CP File
read.adp

Read an ADP File
read.adv

Read an ADV data file
read.adv.nortek

Read an ADV data file
tidemAstron

Astronomical Calculations for Tidem
tidemConstituentNameFix

Change tidal constituent name from T-TIDE to Foreman convention
toEnu

Rotate acoustic-Doppler data to the enu coordinate system
titleCase

Capitalize first letter of each of a vector of words
read.gps

Read a GPS File
read.ctd

Read a General CTD File
read.coastline.shapefile

Read a Coastline File in Shapefile Format
write.ctd

Write a CTD Data Object as a CSV File
read.index

Read a NOAA ocean index file
xbt-class

Class to Store XBT Data
xyzToEnuAdpAD2CP

Convert ADP2CP adp object From XYZ to ENU Coordinates
read.oce

Read an Oceanographic Data File
read.topo

Read a Topo File
read.netcdf

Read a NetCDF File
rskPatm

Estimate Atmospheric Pressure in Rsk Object
read.woa

Read a World Ocean Atlas NetCDF File
siderealTime

Convert a POSIXt time to a sidereal time
rsk2ctd

Create a ctd Object from an rsk Object
showMetadataItem

Show metadata item
xyzToEnuAdv

Convert an ADP from XYZ to ENU Coordinates
[[,odf-method

Extract Something From an ODF Object
[[,rsk-method

Extract Something From a Rsk Object
[[<-,ctd-method

Replace Parts of a ctd Object
[[<-,coastline-method

Replace Parts of a Coastline Object
[[<-,xbt-method

Replace Parts of an xbt Object
subset,cm-method

Subset a CM Object
subset,sealevel-method

Subset a Sealevel Object
subset,argo-method

Subset an Argo Object
subset,adp-method

Subset an ADP Object
subset,section-method

Subset a Section Object
summary,ctd-method

Summarize a ctd Object
sunAngle

Solar Angle as Function of Space and Time
summary,echosounder-method

Summarize an Echosounder Object
swSigma

Seawater density anomaly
swSigma0

Seawater potential density anomaly referenced to surface pressure
swSigma1

Seawater potential density anomaly referenced to 1000db pressure
vectorShow

Show some values from a vector
swSigma2

Seawater potential density anomaly referenced to 2000db pressure
test_met_csv1.csv

Sample met dataset (CSV format prior to October 2019)
velocityStatistics

Report Statistics of adp or adv Velocities
topo-class

Class to Store Topographic Data
topoInterpolate

Interpolate Within a Topo Object
test_met_csv2.csv

Sample met dataset (CSV format as of October 2019)
T90fromT48

Convert from ITS-48 to ITS-90 temperature
T90fromT68

Convert from IPTS-68 to ITS-90 temperature
adv

Sample adv (acoustic-doppler velocimeter) dataset
airRho

Air density
argo

ARGO float dataset
sunDeclinationRightAscension

Sun Declination and Right Ascension