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oce (version 1.6-1)

Analysis of Oceanographic Data

Description

Supports the analysis of Oceanographic data, including 'ADCP' measurements, measurements made with 'argo' floats, 'CTD' measurements, sectional data, sea-level time series, coastline and topographic data, etc. Provides specialized functions for calculating seawater properties such as potential temperature in either the 'UNESCO' or 'TEOS-10' equation of state. Produces graphical displays that conform to the conventions of the Oceanographic literature. This package is discussed extensively by Kelley (2018) "Oceanographic Analysis with R" .

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Version

Install

install.packages('oce')

Monthly Downloads

2,416

Version

1.6-1

License

GPL (>= 2)

Maintainer

Dan Kelley

Last Published

February 18th, 2022

Functions in oce (1.6-1)

ad2cpHeaderValue

Decode an item from a Nortek AD2CP file header
CTD_BCD2014666_008_1_DN.ODF.gz

Sample ctd dataset in odf format
T90fromT48

Convert from ITS-48 to ITS-90 temperature
abbreviateTimeLabels

Abbreviate a vector of times by removing commonalities
GMTOffsetFromTz

Determine time offset from timezone
T90fromT68

Convert from IPTS-68 to ITS-90 temperature
ODFNames2oceNames

Translate ODF CODE strings to Oce Variable Names
ODFListFromHeader

Create a list of ODF header metadata
ODF2oce

Create ODF object from the output of ODF::read_ODF().
T68fromT90

Convert from ITS-90 to IPTS-68 temperature
adpEnsembleAverage

Ensemble Average an ADP Object in Time
adp_rdi.000

Sample adp (acoustic-doppler profiler) file in RDI format
adv-class

Class to Store adv Data
angle2hms

Convert astronomical angle in degrees to hours, minutes and seconds
angleRemap

Convert angles from 0:360 to -180:180
adv

Sample adv (acoustic-doppler velocimeter) dataset
approx3d

Trilinear interpolation in a 3D array
airRho

Air density
applyMagneticDeclination

Earth magnetic declination
adpFlagPastBoundary

Flag adp Data Past Water Column Boundary
as.coastline

Coerce Data into a Coastline Object
as.cm

Coerce data into a CM object
as.ctd

Coerce data into CTD object
argoJuldToTime

Convert Argo Julian Day (juld) to time
addSpine

Add a spine to a section object
as.echosounder

Coerce Data into an Echosounder Object
argoGrid

Grid Argo float data
argo

ARGO float dataset
adp-class

Class to Store adp (ADCP) Data
as.adp

Create an ADP Object
amsr

An amsr dataset for waters near Nova Scotia
amsr-class

Class to Store AMSR-2 Satellite Data
adp

Sample adp (acoustic-doppler profiler) dataset
adpConvertRawToNumeric

Convert Raw to Numeric Values For adp Objects
as.argo

Coerce Data Into an Argo Dataset
as.met

Coerce Data into met Object
argShow

Show an argument to a function, e.g. for debugging
as.topo

Coerce Data into Topo Object
as.unit

Convert a String to a Unit
argo-class

Class to Store Argo Data
as.rsk

Coerce Data Into a Rsk Object
as.gps

Coerce data into a GPS dataset
as.ladp

Coerce data into an ladp object
as.sealevel

Coerce Data Into a Sealevel Object
beamToXyzAdpAD2CP

Convert AD2CP-style adp data From Beam to XYZ Coordinates
beamToXyzAdp

Convert ADP From Beam to XYZ Coordinates
beamToXyz

Change ADV or ADP coordinate systems
beamUnspreadAdp

Adjust ADP Signal for Spherical Spreading
beamName

Get names of Acoustic-Doppler Beams
as.lobo

Coerce Data into a Lobo Object
bcdToInteger

Decode BCD to integer
as.lisst

Coerce Data Into a LISST Object
binAverage

Bin-average a vector y, based on x values
binCount1D

Bin-count vector data
binCount2D

Bin-count matrix data
bilinearInterp

Bilinear Interpolation Within a Grid
as.section

Create a Section
argoNames2oceNames

Convert Argo Data Name to Oce Name
as.tidem

Create tidem object from fitted harmonic data
as.windrose

Create a Windrose Object
as.xbt

Create an xbt object
binMean2D

Bin-average f=f(x,y)
beamToXyzAdv

Convert ADV from Beam to XYZ Coordinates
binApply2D

Apply a function to matrix data
binApply1D

Apply a function to vector data
byteToBinary

binMean1D

Bin-average f=f(x)
cm-class

Class to Store Current Meter Data
as.oce

Coerce Something Into an Oce Object
binmapAdp

Bin-map an ADP object
cm

A Current Meter (cm) Object
cnvName2oceName

Infer variable name, units and scale from a Seabird (.cnv) header line
coastlineWorld

World Coastline
coastlineCut

Cut a Coastline Object at Specified Longitude
composite,amsr-method

Create a composite of amsr satellite data
concatenate,adp-method

Concatenate adp objects
colormapGMT

Create a GMT-type (CPT) colormap
colormap

Calculate color map
concatenate,list-method

Concatenate a list of oce objects
composite

Create a composite object by averaging across good data
coriolis

Coriolis parameter on rotating earth
computableWaterProperties

Available derived water properties
ctd-class

Class to Store CTD (or general hydrographic) Data
decodeTime

Oce Version of as.POSIXct
ctdTrim

Trim Beginning and Ending of a CTD cast
ctimeToSeconds

Interpret a character string as a time interval
composite,list-method

Composite by Averaging Across Data
ctdRaw

Seawater CTD Profile, Without Trimming of Extraneous Data
ctdRepair

Repair a malformed ctd object
ctd.cnv

Sample ctd dataset in .cnv format
ctd

A CTD profile in Halifax Harbour
bremen-class

Class to Store Bremen-formatted Data
bound125

Calculate a rounded bound, rounded up to mantissa 1, 2, or 5
ctdDecimate

Decimate a CTD profile
coastline-class

Class to Store Coastline Data
coastlineBest

Find the Name of the Best Coastline Object
enuToOtherAdp

Convert ADP ENU to Rotated Coordinate
detrend

Detrend a set of observations
despike

Remove spikes from a time series
enuToOther

Rotate acoustic-Doppler data to a new coordinate system
enuToOtherAdv

Convert ENU to Other Coordinate
equatorialToLocalHorizontal

Convert equatorial to local horizontal coordinate
defaultFlags

Suggest a default flag vector for bad or suspicious data
drawDirectionField

Draw a Direction Field
download.amsr

Download and Cache an amsr File
ctdFindProfiles

Find Profiles within a Tow-Yow CTD Record
d200321-001.ctd

Sample ctd dataset in .ctd format
curl

Curl of 2D vector field
geodXyInverse

Inverse Geodesic Calculation
geodXy

Convert From Geographical to Geodesic Coordinates
handleFlags,oce-method

Handle flags in oce objects
handleFlags,section-method

Handle flags in Section Objects
echosounder

Echosounder Dataset
d201211_0011.cnv

Sample ctd dataset in .cnv format
errorbars

Draw error bars on an existing xy diagram
fillGap

Fill a gap in an oce object
drawIsopycnals

Add Isopycnal Curves to TS Plot
fullFilename

Full name of file, including path
eclipticalToEquatorial

Convert ecliptical to equatorial coordinate
initialize,ctd-method

Initialize storage for a ctd object
imagep

Plot an Image with a Color Palette
g1sst-class

Class to Store G1SST Satellite-model Data
gravity

Acceleration due to earth gravity
handleFlags,adp-method

Handle Flags in adp Objects
concatenate,oce-method

Concatenate oce objects
concatenate

Concatenate oce objects
decimate

Smooth and Decimate, or Subsample, an Oce Object
decodeHeaderNortek

Decode a Nortek Header
dataLabel

Try to associate data names with units, for use by summary()
download.coastline

Download a coastline File
initializeFlagScheme,ctd-method

Establish a data-quality scheme for a ctd object
drawPalette

Draw a palette, leaving margins suitable for accompanying plot
initializeFlagScheme,oce-method

Establish a data-quality scheme for a oce object
initializeFlagSchemeInternal

Establish a data-quality scheme for a oce object
initializeFlags,adp-method

Create storage for a flag, and initialize values, for a adp object
initializeFlagsInternal

Create storage for a flag, and initialize values, for a oce object
findBottom

Find the Ocean Bottom in an Echosounder Object
firstFinite

Get first finite value in a vector or array, or NULL if none
download.met

Download and Cache a met File
initializeFlags,oce-method

Create storage for a flag, and initialize values, for a oce object
landsatTrim

Trim a landsat Image to a Geographical Region
initializeFlags

Create storage for a flag, and initialize values, for a oce object
download.topo

Download and Cache a topo File
integerToAscii

Decode integer to corresponding ASCII code
julianCenturyAnomaly

Julian-Day number to Julian century
is.ad2cp

Test whether object is an AD2CP type
latFormat

Format a latitude
locationForGsw

Reform longitude and latitude for use in gsw computations.
lobo

Sample LOBO Dataset
gps-class

Class to Store GPS Data
echosounder-class

Class to Store Echosounder Data
grad

Calculate Matrix Gradient
mapAxis

Add Axis Labels to an Existing Map
mapArrows

Add Arrows to a Map
mapDirectionField

Add a Direction Field to an Existing Map
mapGrid

Add a Longitude and Latitude Grid to an Existing Map
formatPosition

Format Geographical Position in Degrees and Minutes
formatCI

Confidence interval in parenthetic notation
handleFlags,ctd-method

Handle Flags in ctd Objects
handleFlags,argo-method

Handle Flags in ARGO Objects
handleFlagsInternal

Low-level function for handling data-quality flags
head.oce

Extract The Start of an Oce Object
matrixSmooth

Smooth a Matrix
geodDist

Compute Geodesic Distance on Surface of Earth
handleFlags,vector-method

Signal erroneous application to non-oce objects
geodGc

Great-circle Segments Between Points on Earth
handleFlags

Handle flags in oce objects
landsatAdd

Add a Band to a landsat Object
initializeFlagScheme

Establish a data-quality scheme for a oce object
landsat

Sample landsat Dataset
initializeFlagScheme,section-method

Establish a data-quality scheme for a section object
lisst-class

Class to Store LISST Data
makeFilter

Make a digital filter
latlonFormat

Format a latitude-longitude pair
mapPlot

Draw a Map
map2lonlat

Convert X and Y to Longitude and Latitude
integrateTrapezoid

Trapezoidal Integration
interpBarnes

Grid data using Barnes algorithm
mapLines

Add Lines to a Map
mapImage

Add an Image to a Map
met

Sample met Object
metNames2oceNames

Convert met Data Name to Oce Name
landsat-class

Class to Store landsat Data
ladp-class

Class to Store Lowered-adp Data
lon360

Alter longitudes from -180:180 to 0:360 convention
lonFormat

Format a longitude
julianDay

Convert a time to a Julian day
labelWithUnit

Create label with unit
mapPoints

Add Points to a Map
oce.grid

Add a Grid to an Existing Oce Plot
oce.contour

Oce Variant of contour
magneticField

Earth magnetic declination, inclination, and intensity
lowpass

Perform lowpass digital filtering
oce-deprecated

Deprecated and Defunct Elements of the oce package
numberAsPOSIXct

Convert a Numeric Time to a POSIXct Time
met-class

Class to Store Meteorological Data
mapText

Add Text to a Map
mapTissot

Add Tissot Indicatrices to a Map
oceColors9B

Create colors in a red-yellow-blue color scheme
oceCRS

Coordinate Reference System strings for some oceans
oce.as.raw

Version of as.raw() that clips data
oce.axis.POSIXct

Oce Version of axis.POSIXct
oce

oce: A Package for Oceanographic Analysis.
oceColorsPalette

Create a vector of colors
oceColorsPAR

Create colors suitable for PAR fields
oceDeleteMetadata

Delete Something in an oce metadata Slot
lisst

LISST Dataset
lobo-class

Class to Store LOBO Data
longitudeTighten

Try to Reduce Section Longitude Range
oce-class

Base Class for oce Objects
oceColorsFreesurface

Create colors suitable for freesurface fields
oceColorsGebco

Create colors in a Gebco-like scheme
oceColorsTemperature

Create colors suitable for temperature fields
oceColorsTurbidity

Create colors suitable for turbidity fields
oceColorsCDOM

Create colors suitable for CDOM fields
oceEdit

Edit an Oce Object
lonlat2map

Convert Longitude and Latitude to X and Y
oceColorsChlorophyll

Create colors suitable for chlorophyll fields
oceColorsVorticity

Create colors suitable for vorticity fields
mapContour

Add Contours on a Existing map
mapCoordinateSystem

Draw a coordinate system
plot,adv-method

Plot an adv Object
plot,amsr-method

Plot an amsr Object
oceColorsTurbo

Create colors similar to the google turbo scheme
oceFilter

Filter a Time Series
oceColorsTwo

Create two-color palette
oceConvolve

Convolve two time series
oceGetData

Get Something from an oce data Slot
ocePmatch

Partial matching of strings or numbers
oceNames2whpNames

Translate Oce Data Names to WHP Data Names
plot,landsat-method

Plot a landsat Object
plot,lisst-method

Plot a lisst Object
oceRenameMetadata

Rename Something in an oce metadata Slot
parseLatLon

Parse a Latitude or Longitude String
plot,rsk-method

Plot a rsk Object
plot,satellite-method

Plot a satellite Object
read.adp

Read an ADP File
read.adp.ad2cp

Read an AD2CP File
plotTS

Plot Temperature-Salinity Diagram
plotSticks

Draw a Stick Plot
read.adp.sontek

Read a Sontek ADP File
read.adp.sontek.serial

Read a serial Sontek ADP file
read.gps

Read a GPS File
oceRenameData

Rename Something in an oce data Slot
oceProject

Wrapper to sf::sf_project()
lonlat2utm

Convert Longitude and Latitude to UTM
plot,adp-method

Plot an adp Object
plot,coastline-method

Plot a coastline Object
plot,cm-method

Plot a cm Object
read.xbt

Read an xbt file
read.odf

Read an ODF file
read.index

Read a NOAA ocean index file
read.rsk

Read a Rsk file
oceSetData

Set Something in an oce data Slot
mapPolygon

Add a Polygon to a Map
plot,bremen-method

Plot a bremen Object
plot,argo-method

Plot an argo Object
odf-class

Class to Store ODF Data
ocecolors

Data that define some color palettes
lookWithin

Look Within the First Element of a List for Replacement Values
plot,sealevel-method

Plot a sealevel Object
plot,section-method

Plot a section Object
mapLocator

Locate Points on a Map
mapLongitudeLatitudeXY

Convert From Longitude and Latitude to X and Y
numberAsHMS

Convert a Numeric Time to Hour, Minute, and Second
moonAngle

Lunar Angle as Function of Space and Time
read.xbt.edf

Read a Sippican '.edf' format xbt file
mapScalebar

Add a Scalebar to a Map
matchBytes

Locate byte sequences in a raw vector
oceApprox

Interpolate 1D Data with UNESCO or Reiniger-Ross Algorithm
read.ctd

Read a General CTD File
read.amsr

Read an amsr File
read.adv.sontek.text

Read an ADV data file
oceAxis

Draw an axis, possibly with decade-style logarithmic scaling
read.coastline.shapefile

Read a Coastline File in Shapefile Format
matrixShiftLongitude

Rearrange areal matrix so Greenwich is near the centre
oceColorsPhase

Create colors suitable for phase fields
oceColorsSalinity

Create colors suitable for salinity fields
summary,tidem-method

Summarize a Tidem Object
read.met

Read a met File
plot,lobo-method

Plot a lobo object
plotTaylor

Plot a Model-data Comparison Diagram
read.ctd.itp

Read an ITP-type CTD File
[[,landsat-method

Extract Something From a landsat Object
oce.plot.ts

Oce Variant of plot.ts
read.ctd.odf

Read a CTD file in ODF format
oce.write.table

Write the Data Portion of Object to a File
rsk-class

Class to Store Rsk Data
read.xbt.noaa1

Read a NOAA format for AXBTs
read.lobo

Read a LOBO File
oceColorsClosure

Create color functions
oceDebug

Print a debugging message
sealevel

Sealevel data for Halifax Harbour
renameData

Rename items in the data slot of an oce object (defunct)
[[<-,landsat-method

Replace Parts of a landsat Object
predict.tidem

Predict a Tidal Signal
plot,met-method

Plot a met Object
sealevelTuktoyaktuk

Sea-level data set acquired in 1975 at Tuktoyaktuk
oceDeleteData

Delete Something in an oce data Slot
oceMagic

Find the Type of an Oceanographic Data File
oceGetMetadata

Get Something From an oce metadata Slot
oceColorsDensity

Create colors suitable for density fields
secondsToCtime

Time interval as colon-separated string
section-class

Class to Store Hydrographic Section Data
oceColorsJet

Create colors similar to the Matlab Jet scheme
oceColorsOxygen

Create colors suitable for oxygen fields
[[,odf-method

Extract Something From an ODF Object
[[,ladp-method

Extract Something From an ladp Object
[[,rsk-method

Extract Something From a Rsk Object
processingLogAppend

Append an item to a processing log
summary,lisst-method

Summarize a LISST Object
plot,echosounder-method

Plot an echosounder Object
plot,topo-method

Plot a topo Object
plot,ctd-method

Plot a ctd Object
plot,tidem-method

Plot a tidem Object
processingLogItem

Create an item that can be inserted into a processing log
[[<-,lisst-method

Replace Parts of a LISST Object
subset,adv-method

Subset an ADV Object
plotProfile

Plot a CTD Profile
plotScan

Plot CTD data in a Low-Level Fashion
oceColorsViridis

Create colors similar to the matlab Viridis scheme
oceColorsVelocity

Create colors suitable for velocity fields
oceSetMetadata

Set Something in an oce metadata Slot
oceSmooth

Smooth an Oce Object
read.ctd.sbe

Read a Seabird CTD File
oceSpectrum

Wrapper to give normalized spectrum
oceUnits2whpUnits

Translate oce unit to WHP unit
subset,echosounder-method

Subset an Echosounder Object
rsk

Sample Rsk Dataset
swAlphaOverBeta

Ratio of seawater thermal expansion coefficient to haline contraction coefficient
processingLogShow

Show the processing log of an oce object
plot,gps-method

Plot a gps Object
[[<-,echosounder-method

Replace Parts of an Echosounder Object
pwelch

Welch periodogram
subset,amsr-method

Subset an amsr Object
swBeta

Seawater haline contraction coefficient
summary,landsat-method

Summarize a landsat Object
read.adv

Read an ADV data file
plot,windrose-method

Plot a windrose Object
plot,ladp-method

Plot an ladp Object
plot,xbt-method

Plot an xbt Object
plot,oce-method

Plot an oce Object
read.aquadoppProfiler

Read a Nortek Aquadopp-Profiler File
read.adv.nortek

Read an ADV data file
summary,ladp-method

Summarize an ladp object
read.argo

Read an Argo Data File
setFlags

Set data-quality flags within a oce object
read.g1sst

Read a G1SST file
read.echosounder

Read an Echosounder File
read.landsat

Read a landsat File Directory
plot,odf-method

Plot an odf Object
summary,adv-method

Summarize an ADV object
read.ctd.odv

Read an ODV-type CTD File
plotPolar

Draw a Polar Plot
plotInset

Plot an Inset Diagram
read.lisst

Read a LISST File
retime

Adjust the time within Oce object
subset,lobo-method

Subset a LOBO Object
read.coastline

Read a Coastline File
read.coastline.openstreetmap

Read a Coastline File in Openstreetmap Format
preferAdjusted

Set Preference for Adjusted Values
shiftLongitude

Shift Longitude to Range -180 to 180
swSR

Seawater Reference Salinity, in GSW formulation
summary,amsr-method

Summarize an amsr Object
rescale

Rescale values to lie in a given range
rangeExtended

Calculate Range, Extended a Little, as is Done for Axes
rangeLimit

Substitute NA for data outside a range
read.adv.sontek.adr

Read an ADV data file
[[<-,ctd-method

Replace Parts of a ctd Object
standardizeLongitude

Put longitude in the range from -180 to 180
runlm

Calculate running linear models
rotateAboutZ

Rotate velocity components within an oce object
read.aquadopp

Read a Nortek Aquadopp File
read.ctd.woce

Read a WOCE-exchange CTD File
read.adv.sontek.serial

Read an ADV data file
tidemAstron

Astronomical Calculations for Tidem
test_met_csv1.csv

Sample met dataset (CSV format prior to October 2019)
summary,rsk-method

Summarize a Rsk Object
[[,sealevel-method

Extract Something From a Sealevel Object
[[,section-method

Extract Something From a Section Object
rsk2ctd

Create a ctd Object from an rsk Object
[[,ctd-method

Extract Something From a ctd Object
test_met_csv2.csv

Sample met dataset (CSV format as of October 2019)
summary,satellite-method

Summarize a satellite object
prettyPosition

Pretty lat/lon in deg, min, sec
rskPatm

Estimate Atmospheric Pressure in Rsk Object
[[<-,g1sst-method

Replace Parts of a G1SST Object
read.aquadoppHR

Read Nortek Aquadopp-HR File
setFlags,oce-method

Set data-quality flags within a oce object
[[<-,coastline-method

Replace Parts of a Coastline Object
webtide

Get a Tidal Prediction from a WebTide Database
subset,adp-method

Subset an ADP Object
read.sealevel

Read a Sealevel File
swSTrho

Seawater salinity from temperature and density
unitFromStringRsk

Infer Rsk units from a vector of strings
presentTime

Get the present time, in a stated timezone
read.woa

Read a World Ocean Atlas NetCDF File
read.section

Read a Section File
read.adp.nortek

Read a Nortek ADP File
processingLog<-

Add an item to a processing log (in place)
[[,adv-method

Extract Something from an adv Object
read.oce

Read an Oceanographic Data File
unabbreviateYear

Determine year from various abbreviations
rskToc

Decode table-of-contents File from a Rsk File
sectionGrid

Grid a Section in Pressure Space
[[,adp-method

Extract Something from an adp Object
tidemConstituentNameFix

Change tidal constituent name from T-TIDE to Foreman convention
unitFromString

Decode units, from strings
summary,topo-method

Summarize A Topo Object
[[<-,xbt-method

Replace Parts of an xbt Object
sectionSmooth

Smooth a Section
summary,gps-method

Summarize a GPS Object
[[,topo-method

Extract Something From a Topo Object
[[<-,adv-method

Replace Parts of an ADV Object
xbt-class

Class to Store XBT Data
undriftTime

Correct for drift in instrument clock
write.ctd

Write a CTD Data Object as a CSV File
standardDepths

Standard Oceanographic Depths
setFlags,ctd-method

Set data-quality flags within a ctd object
[[<-,gps-method

Replace Parts of a GPS Object
subset,odf-method

Subset an ODF object
snakeToCamel

Convert each of a vector of strings from SNAKE_CASE to camelCase
[[,echosounder-method

Extract Something from an Echosounder Object
[[,argo-method

Extract Something From an Argo Object
resizableLabel

Provide axis names in adjustable sizes
sectionSort

Sort a Section
[[,tidem-method

Extract Something From a tidem Object
subset,topo-method

Subset a Topo Object
[[<-,rsk-method

Replace Parts of a Rsk Object
[[<-,adp-method

Replace Parts of an ADP Object
read.netcdf

Read a NetCDF File
setFlags,adp-method

Set data-quality flags within a adp object
subset,met-method

Subset a met Object
[[,cm-method

Extract Something From a cm Object
[[<-,odf-method

Replace Parts of an ODF Object
[[,windrose-method

Extract Something From a Windrose Object
[[<-,section-method

Replace Parts of a Section Object
[[<-,lobo-method

Replace Parts of a LOBO Object
read.adp.rdi

Read a Teledyne/RDI ADP File
[[,amsr-method

Extract Something From an amsr Object
swSpecificHeat

Seawater specific heat
[[,coastline-method

Extract Something From a Coastline Object
subset,oce-method

Subset an oce Object
[[,met-method

Extract Something From a met Object
[[,bremen-method

Extract Something From a Bremen Object
subset,coastline-method

Subset a Coastline Object
[[<-,ladp-method

title Replace Parts of a ladp Object
summary,xbt-method

Summarize an xbt Object
[[<-,bremen-method

Replace Parts of a Bremen Object
[[,lisst-method

Extract Something From a LISST Object
[[<-,met-method

Replace Parts of a met Object
[[,oce-method

Extract Something From an oce Object
read.bremen

Read a Bremen File
read.cm

Read a CM file
[[,g1sst-method

Extract Something From a G1SST Object
[[<-,topo-method

Replace Parts of a Topo Object
read.topo

Read a Topo File
read.ctd.woce.other

Read a WOCE-exchange EXPOCODE File
[[,lobo-method

Extract Something From a LOBO Object
swCSTp

Electrical conductivity ratio from salinity, temperature and pressure
sealevel-class

Class to Store Sealevel Data
[[<-,cm-method

Replace Parts of a CM Object
threenum

Calculate min, mean, and max values
subset,argo-method

Subset an Argo Object
swDepth

Water depth
swSpice

Seawater spiciness
tidem

Fit a Tidal Model to a Timeseries
[[,xbt-method

Extract Something From an xbt Object
section

Hydrographic section
[[<-,argo-method

Replace Parts of an Argo Object
siderealTime

Convert a POSIXt time to a sidereal time
satellite-class

Class to Store Satellite Data
test_met_xml2.xml

Sample met dataset (XML format as of October 2019)
xyzToEnuAdv

Convert an ADP from XYZ to ENU Coordinates
sectionAddStation

Add a CTD Station to a Section
showMetadataItem

Show metadata item
[[,gps-method

Extract Something From a GPS Object
swSigma0

Seawater potential density anomaly referenced to surface pressure
[[<-,tidem-method

Replace Parts of a Tidem Object
swSigma

Seawater density anomaly
summary,windrose-method

Summarize a windrose object
subset,cm-method

Subset a CM Object
sunAngle

Solar Angle as Function of Space and Time
[[<-,windrose-method

Replace Parts of a Windrose Object
swTSrho

Seawater temperature from salinity and density
subset,rsk-method

Subset a Rsk Object
summary,cm-method

Summarize a CM Object
swDynamicHeight

Dynamic height of seawater profile
swSigma3

Seawater potential density anomaly referenced to 3000db pressure
subset,xbt-method

Subset an xbt Object
[[<-,amsr-method

Replace Parts of an amsr Object
toEnu

Rotate acoustic-Doppler data to the enu coordinate system
swSigma4

Seawater potential density anomaly referenced to 4000db pressure
titleCase

Capitalize first letter of each of a vector of words
summary,argo-method

Summarize an Argo Object
subset,sealevel-method

Subset a Sealevel Object
[[<-,oce-method

Replace Parts of an Oce Object
subtractBottomVelocity

Subtract Bottom Velocity from ADP
swConservativeTemperature

Seawater conservative temperature, in GSW formulation
summary,lobo-method

Summarize a LOBO Object
summary,met-method

Summarize a met Object
subset,section-method

Subset a Section Object
swViscosity

Seawater viscosity
summary,section-method

Summarize a Section Object
swRho

Seawater density
tidem-class

Class to Store Tidal Models
xbt.edf

Sample xbt dataset
xbt

An XBT Object
swThermalConductivity

Seawater thermal conductivity
summary,sealevel-method

Summarize a Sealevel Object
unduplicateNames

Rename duplicated character strings
ungrid

Extract (x, y, z) from (x, y, grid)
[[<-,sealevel-method

Replace Parts of a Sealevel Object
summary,ctd-method

Summarize a ctd Object
topo-class

Class to Store Topographic Data
swSigma2

Seawater potential density anomaly referenced to 2000db pressure
velocityStatistics

Report Statistics of adp or adv Velocities
summary,bremen-method

Summarize a Bremen Object
subset,ctd-method

Subset a ctd Object
window.oce

Window an Oce Object by Time or Distance
vectorShow

Show some values from a list, vector or matrix
swSigma1

Seawater potential density anomaly referenced to 1000db pressure
swLapseRate

Seawater lapse rate
swN2

Squared buoyancy frequency for seawater
swTheta

Seawater potential temperature
summary,adp-method

Summarize an ADP Object
trimString

Remove leading and trailing whitespace from strings
summary,echosounder-method

Summarize an Echosounder Object
tidemVuf

Nodal Modulation Calculations for Tidem
summary,coastline-method

Summarize a Coastline Object
summary,oce-method

Summarize an oce Object
windrose-class

Class to Store Windrose Data
swSigmaT

Seawater quasi-potential density anomaly
topoInterpolate

Interpolate Within a Topo Object
topoWorld

Global Topographic Dataset at Half-degree Resolution
swRrho

Density ratio
sunDeclinationRightAscension

Sun Declination and Right Ascension
summary,odf-method

Summarize an ODF Object
usrLonLat

Calculate lon-lat coordinates of plot-box trace
swZ

Vertical coordinate
utm2lonlat

Convert UTM to Longitude and Latitude
tail.oce

Extract the End of an Oce Object
tidalCurrent

Tidal Current Dataset
swSCTp

Practical salinity from electrical conductivity, temperature and pressure
swSigmaTheta

Seawater potential density anomaly
xyzToEnuAdpAD2CP

Convert ADP2CP adp object From XYZ to ENU Coordinates
wind

Wind dataset
tidedata

Tidal Constituent Information
useHeading

Replace the Heading for One Instrument With That of Another
swPressure

Water pressure
unwrapAngle

Unwrap an angle that suffers modulo-360 problems
swSstar

Seawater Preformed Salinity, in GSW formulation
swAbsoluteSalinity

Seawater absolute salinity, in GSW formulation
swAlpha

Seawater thermal expansion coefficient
timeToArgoJuld

Convert time to Argo Julian Day (juld)
swSoundAbsorption

Seawater sound absorption in dB/m
toEnuAdv

Convert an ADV Object to ENU Coordinates
swSoundSpeed

Seawater sound speed
swTFreeze

Seawater freezing temperature
woceNames2oceNames

Translate WOCE Data Names to Oce Data Names
xyzToEnuAdp

Convert ADP From XYZ to ENU Coordinates
toEnuAdp

Convert an ADP Object to ENU Coordinates
woceUnit2oceUnit

Translate WOCE units to oce units
xyzToEnu

Convert Acoustic-Doppler Data From xyz to enu Coordinates