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octopucs (version 0.1.1)

Statistical Support for Hierarchical Clusters

Description

Generates n hierarchical clustering hypotheses on subsets of classifiers (usually species in community ecology studies). The n clustering hypotheses are combined to generate a generalized cluster, and computes three metrics of support. 1) The average proportion of elements conforming the group in each of the n clusters (integrity). And 2) the contamination, i.e., the average proportion of elements from other groups that enter a focal group. 3) The probability of existence of the group gives the integrity and contamination in a Bayesian approach.

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Version

Install

install.packages('octopucs')

Monthly Downloads

135

Version

0.1.1

License

GPL-3

Maintainer

Roger Guevara

Last Published

August 16th, 2024

Functions in octopucs (0.1.1)

glzcluster2

Generalized Cluster
octopucs

Support for Hierarchical Clusters
IDscluster2

Memberships of Groups and Subgroups
IDscluster

Memberships of Groups and Subgroups
draw.octopucs

Draw the Generalized Clustering Hypothesis
F1

Labeling of memberships of two groups
glzcs

Support for Groups and Subgroups in the Generalized Dendrogram
compsim2

Complementarity and disimilarity
glzcluster

Generalized Cluster