can_compile

Test if compilation appears possible. This is used in some
examples, and tries compiling a trivial C program with
<code>pkgbuild</code>. Results are cached between runs within a session
so this should be fast to rely on.

Generate systems of ordinary differential equations
(ODE) and integrate them, using a domain specific language
(DSL).  The DSL uses R's syntax, but compiles to C in order to
efficiently solve the system.  A solver is not provided, but
instead interfaces to the packages 'deSolve' and 'dde' are
generated.  With these, while solving the differential equations,
no allocations are done and the calculations remain entirely in
compiled code.  Alternatively, a model can be transpiled to R for
use in contexts where a C compiler is not present.  After
compilation, models can be inspected to return information about
parameters and outputs, or intermediate values after calculations.
'odin' is not targeted at any particular domain and is suitable
for any system that can be expressed primarily as mathematical
expressions.  Additional support is provided for working with
delays (delay differential equations, DDE), using interpolated
functions during interpolation, and for integrating quantities
that represent arrays.

Rich FitzJohn

odin

ODE Generation and Integration

Thibaut Jombart

Imperial College of Science, Technology and Medicine 

can_compile function

<dl><dt>verbose</dt>
<dd>Be verbose when running commands?</dd>
<dt>refresh</dt>
<dd>Try again to compile, skipping the cached value?</dd></dl>

Arguments

Test if compilation is possible — can_compile

<dl>

<dt>verbose</dt>
<dd>Be verbose when running commands?</dd>


<dt>refresh</dt>
<dd>Try again to compile, skipping the cached value?</dd>

</dl>

can_compile: Test if compilation is possible

Description

Usage

Value

Arguments

Details

Examples