ohvbd (version 1.0.0)

search_vt_smart: Search VecTraits using the explorer's filters

Description

Retrieve the IDs for any VecTraits datasets matching the given filter.

Usage

search_vt_smart(field, operator, value, basereq = vb_basereq())

Value

An ohvbd.ids vector of VecTraits dataset IDs.

Arguments

field

a field of VecTraits to search.

operator

an operator to use when searching.

value

the value that the field might/might not be.

basereq

an httr2 request object, as generated by vb_basereq(). If NA, uses the default request.

Valid fields

The following field names are valid (shortcut names are listed in brackets):

• DatasetID (id)

• OriginalTraitName (traitname)

• Variables

• Interactor1Order (order)

• Interactor1Family (family)

• Interactor1Genus (genus)

• Interactor1Species (species, spp)

• Interactor1Stage (stage)

• Interactor1Sex (sex)

• Interactor2Genus (genus2)

• Interactor2Species (species2, spp2)

• Citation (cite)

• DOI

• CuratedByDOI (curateddoi)

• SubmittedBy (who)

• Tags

Valid operators

The following operators are valid (alternative names are listed in brackets):

• contains (contain, has, have)

• !contains (!contains, !has, !have, ncontains)

• equals (=, ==, equal, eq)

• !equals (!=, not, !equal, !eq, neq)

• starts (starts with, start with, start, sw)

• !starts (not starts with, not start with, !start, nsw)

• in (within)

• !in (not in, not within, !within, nin)

Author

Francis Windram

Examples

if (FALSE) { # interactive()
search_vt_smart("Interactor1Genus", "equals", "Anopheles")
}