calculate_lof

Calculate Local Outlier Factor (LOF)

Processing and analyzing omics data from genomics, transcriptomics, proteomics, and metabolomics platforms. It provides functions for preprocessing, normalization, visualization, and statistical analysis, as well as machine learning algorithms for predictive modeling. 'omicsTools' is an essential tool for researchers working with high-throughput omics data in fields such as biology, bioinformatics, and medicine.The QC-RLSC (quality control–based robust LOESS signal correction) algorithm is used for normalization. Dunn et al. (2011) <doi:10.1038/nprot.2011.335>.

Yaoxiang Li

omicsTools

Omics Data Process Toolbox

calculate_lof function

<dl><dt>values</dt>
<dd>A numeric vector of values for which to calculate LOF.</dd>
<dt>k</dt>
<dd>The number of neighbors to use for calculating LOF. Defaults to 5.</dd></dl>

Arguments

Calculate Local Outlier Factor (LOF) — calculate_lof

<dl>

<dt>values</dt>
<dd>A numeric vector of values for which to calculate LOF.</dd>


<dt>k</dt>
<dd>The number of neighbors to use for calculating LOF. Defaults to 5.</dd>

</dl>

calculate_lof: Calculate Local Outlier Factor (LOF)

Description

Usage

Value

Arguments

Examples