buildingLocalAnnotation


 Internal oneChannelGUI Gene-level annotation data can be upgraded using this function,
 which queries netaffx database. The exon-level annotations  are upadated using UCSC golden path data.
 annotation RDA files are saved in the data subdir of oneChannelGUI dir. Windows users need to exchange
 the older copies present in Rdata.zip, simply dragging them in the zip file. 


 methods 

This package was developed to simplify the use of
Bioconductor tools for beginners having limited or no
experience in writing R code. This library provides a graphical
interface for microarray gene and exon level analysis as well
as miRNA/mRNA-seq data analysis

Raffaele A Calogero

oneChannelGUI

A graphical interface designed to facilitate analysis of
microarrays and miRNA/RNA-seq data on laptops

buildingLocalAnnotation function

Internal oneChannelGUI Gene-level annotation data can be upgraded using this function,
 which queries netaffx database. The exon-level annotations  are upadated using UCSC golden path data.
 annotation RDA files are saved in the data subdir of oneChannelGUI dir. Windows users need to exchange
 the older copies present in Rdata.zip, simply dragging them in the zip file.

buildingLocalAnnotation: Updates local gene-level annotation data for gene and exon arrays using the netaffx database

Description

Usage

Arguments