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oneChannelGUI (version 1.38.0)

dexCounts: dexCounts

Description

This function summarises counts using DEXseq python scripts.

Usage

dexCounts()

Arguments

Details

This function uses the python scripts present in DEXseq package to summarise at the level of exons the reads derived by a sam file. The function needs to be run for each sample. It runs in background. It is necessary the installation of HTSeq python library