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oneChannelGUI (version 1.38.0)

exonScaffold: stand alone function to generate a scaffold containing only exon location from ENSEMBL

Description

The scaffold contains chr stand start and end position of exon. Ensembl geneID and exonID together with exon rank are also provided

Usage

exonScaffold(genome)

Arguments

genome
The genome code for H sapiens is hg19, for M musculus is mm9 and for R norvegicus is rn4

Details

The scaffold is used to map reads data into regions only associated to exons