ontologyPlot (version 1.7)

colour_by_frequency: Function to assign colours to terms based on frequency with which terms appear in term_sets

Description

Function to assign colours to terms based on frequency with which terms appear in term_sets

Usage

colour_by_frequency(
  ontology,
  terms,
  term_sets,
  colour_func = colorRampPalette(c("Yellow", "Green", "#0099FF"))
)

Value

Character vector of colours, named by term

Arguments

ontology

ontology_index object

terms

Character vector of ontological terms

term_sets

List of character vectors of ontological term IDs

colour_func

Function capable of returning a set of colours, given the number of colours it needs to return

See Also

colour_by_term_set, colour_by_population_frequency