remove_links

Remove terms which just link two other terms together in a subontology

Create R plots visualising ontological terms and the relationships between them with various graphical options - Greene et al. 2017 <doi:10.1093/bioinformatics/btw763>.

Daniel Greene

ontologyPlot

Visualising Sets of Ontological Terms

remove_links function

<dl><dt>ontology</dt>
<dd><code>ontology_index</code> object</dd>
<dt>terms</dt>
<dd>Character vector of ontological terms</dd>
<dt>hard</dt>
<dd>Logical value determining whether to multiple edges to leaf terms are kept - <code>`hard=FALSE`</code>, or removed - <code>`hard=TRUE`</code>.</dd></dl>

Arguments

Remove terms which just link two other terms together in a subontology — remove_links

<dl>

<dt>ontology</dt>
<dd><code>ontology_index</code> object</dd>


<dt>terms</dt>
<dd>Character vector of ontological terms</dd>


<dt>hard</dt>
<dd>Logical value determining whether to multiple edges to leaf terms are kept - <code>`hard=FALSE`</code>, or removed - <code>`hard=TRUE`</code>.</dd>

</dl>

remove_links: Remove terms which just link two other terms together in a subontology

Description

Usage

Value

Arguments

See Also

Examples