get_sim_p

sym_sim_mat

Character or integer vector of cases specifying rownames/indices of cases for which to calculate a similarity p-value.

case_group

Minimum number of simulated group similarities to calculate

min_its

Maximum number of simulated group similarities to calculate

max_its

Threshold p-value of statistical significance

signif

Threshold of log probability, below which to trigger return of current estimated p-value

log_dismiss

Functions for calculating semantic similarities between ontological terms or sets of ontological terms based on term information content and assessing statistical significance of similarity in the context of a collection of sets of ontological terms.

get_sim_p: Get similarity p-value

Description

Usage

Arguments

Value

See Also