Brassica

RNA-sequencing data of genetically identical Brassica napus plants in autumn, with 5 phenotypes next spring, as published by DeMeyer2022oosse.

datasets

Estimates out-of-sample R² through bootstrap or cross-validation as a measure of predictive performance. In addition, a standard error for this point estimate is provided, and confidence intervals are constructed.

Stijn Hawinkel

oosse

Out-of-Sample R² with Standard Error Estimation

Brassica function

A list with two components Expr and Pheno<dl>
 <dt>Expr</dt>
<dd>Matrix with Rlog values of 1000 most expressed genes</dd> <dt>Pheno</dt>
<dd>Data frame with 5 phenotypes and x and y coordinates of the plants in the field</dd>
</dl>

Format

Gene expression and phenotypes of Brassica napus (rapeseed) plants — Brassica

A list with two components Expr and Pheno<dl>
 <dt>Expr</dt>
<dd>Matrix with Rlog values of 1000 most expressed genes</dd>

 <dt>Pheno</dt>
<dd>Data frame with 5 phenotypes and x and y coordinates of the plants in the field</dd>


</dl>

Brassica: Gene expression and phenotypes of Brassica napus (rapeseed) plants

Description

Usage

Arguments

Format

References