opalr (version 1.5.2)

oadmin.install_github: Install a package from GitHub (deprecated)

Description

Install a package from a source repository on GitHub.

Usage

oadmin.install_github(
  opal,
  pkg,
  username = getOption("github.user"),
  ref = "master",
  auth_user = NULL,
  password = NULL
)

Arguments

opal

Opal object or list of opal objects.

pkg

Package name.

username

GitHub user or organization name.

ref

Desired git reference. Could be a commit, tag, or branch name. Defaults to "master".

auth_user

(ignored) Your github username if you're attempting to install a package hosted in a private repository (and your username is different to username).

password

(ignored) Your github password

See Also

Other administration functions: oadmin.install_bioconductor_package(), oadmin.install_devtools(), oadmin.install_github_package(), oadmin.install_local_package(), oadmin.install_package(), oadmin.installed_devtools(), oadmin.installed_packages(), oadmin.installed_package(), oadmin.package_description(), oadmin.remove_package()

Examples

# NOT RUN {
o <- opal.login('administrator','password', url='https://opal-demo.obiba.org')
oadmin.install_github(o, 'opalr', 'obiba')
opal.logout(o)
# }