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openVA (version 1.0.1)

Automated Method for Verbal Autopsy

Description

Implements multiple existing open-source algorithms for coding cause of death from verbal autopsies. It also provides tools for data manipulation tasks commonly used in Verbal Autopsy analysis and implements easy graphical visualization of individual and population level statistics.

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Version

Install

install.packages('openVA')

Monthly Downloads

282

Version

1.0.1

License

GPL-2

Maintainer

Zehang Li

Last Published

March 28th, 2016

Functions in openVA (1.0.1)

getCSMF

Obtain CSMF from fitted model
stackplotVA

plot grouped CSMF from a "insilico" object
ConvertData.phmrc

Convert standard PHMRC data into binary indicator format
plotVA

Plot top CSMF for a fitted model
getTopCOD

Extract the most likely cause of death
ConvertData

Converting Input data with different coding scheme to standard format
codeVA

Running automated method on VA data
interVA.train

Extended InterVA method for non-standard input
getIndivProb

Extract individual distribution of cause of death
getPHMRC_url

Get the URL to the PHMRC dataset