optiSel (version 0.9.1)

summary.opticont: Summary Statistics and Check of Validity for Optimum Contributions.

Description

Computation of genetic parameters and check of validity for optimum genetic contributions of the selection candidates.

Usage

# S3 method for opticont
summary(object, ...)

Arguments

object

An object from class opticont, which is usually the output of function opticont.

...

further arguments passed to or from other methods

Value

A data frame with one row and the following columns is returned:

VarName	Name of parameter x
method	Method used for optimization
obj.fun	Value of the objective function
valid	TRUE if the side constraints are fulfilled by the optimum contributions.
KIN	The mean kinship in the offspring (one component for each kinship matrix included
	in the call of function opticont).
ub.KIN	The upper bound for the mean kinship in the offspring (one component for each
	kinship matrix included in the call of function opticont).
Div.KIN	The mean genetic diversity (=1-KIN) in the offspring (one component
	for each kinship matrix included in the call of function opticont).
ubM	Upper bound for the contribution of males
ubF	Upper bound for the contribution of females
ContMales	The total contribution of breeding males to the offspring (should be 0.5)
ContFemales	The total contribution of breeding females to the offspring (should be 0.5)
minCont	The minimum contribution of a breeding animal
maxContMale	The maximum contribution of a breeding male
maxContFemale	The maximum contribution of a breeding female
solver	Algorithm used for optimization
lb.VAR	The lower bound for the mean value of VAR in the offspring (one
	component for each numeric column VAR of data frame phen
	included in the call of function opticont).
meanVAR	The mean value of VAR in the offspring (one component for each
	numeric column VAR of data frame phen included in the call of
	function opticont).
ub.VAR	The upper bound for the mean value of VAR in the offspring (one
	component for each numeric column VAR of data frame phen
	included in the call of function opticont).

Details

Computation of genetic parameters and check of validity for optimum genetic contributions of the selection candidates.

Examples

# NOT RUN {
#see ?opticont
# }