calibrateImage

cal_img

Rescales image <code>cal_max</code> and <code>cal_min</code> slots to 
be the max and min, respectively, of an object of class nifti, with 
<code>na.rm = TRUE</code>. This is so that when images are rendered/written, 
the values correspond to those in the array (stored in <code>.Data</code> slot) 
are plotted on correct greyscale and no error is given by <code>writeNIfTI</code>.

Functions for the input/output and visualization of
medical imaging data that follow either the 'ANALYZE', 'NIfTI' or 'AFNI'
formats.  This package is part of the Rigorous Analytics bundle.

Brandon Whitcher

oro.nifti

Rigorous - 'NIfTI' + 'ANALYZE' + 'AFNI' : Input / Output

Volker Schmid

Andrew Thornton

Karsten Tabelow

Jon Clayden

John Muschelli

calibrateImage function

<dl><dt>img</dt>
<dd>is a <code>nifti</code> object.</dd>
<dt>infok</dt>
<dd>is a logical value whether or not <code>Inf</code> and 
<code>-Inf</code> are acceptable (default = <code>TRUE</code>). If <code>FALSE</code> 
and max or min is infinity, then <code>cal_min</code> or <code>cal_max</code> is 
set to infinity (negative or positive), respectively.</dd></dl>

Arguments

John Muschelli <a href="/link/muschellij2%40gmail.com?package=oro.nifti&version=0.11.4" data-mini-rdoc="oro.nifti::muschellij2@gmail.com">muschellij2@gmail.com</a>

Author

Set Minimum/Maximum Values for NIfTI data — calibrateImage

<dl>

<dt>img</dt>
<dd>is a <code>nifti</code> object.</dd>


<dt>infok</dt>
<dd>is a logical value whether or not <code>Inf</code> and 
<code>-Inf</code> are acceptable (default = <code>TRUE</code>). If <code>FALSE</code> 
and max or min is infinity, then <code>cal_min</code> or <code>cal_max</code> is 
set to infinity (negative or positive), respectively.</dd>

</dl>

John Muschelli <a href='mailto:muschellij2@gmail.com'>muschellij2@gmail.com</a>

calibrateImage: Set Minimum/Maximum Values for NIfTI data

Description

Usage

Value

Arguments

Author