osmose (version 0.1.0)

getFishingMortality: Get fishing mortality rate.

Description

Get fishing mortality rate.

Usage

getFishingMortality(sp, fishing, T, ndt)

Arguments

sp

Species index (sp0, sp1, sp2, etc.)

fishing

List of fishing parameters

T

Number of years

ndt

Time step

Value

Fishing mortality rate.

Details

$$F = \frac{B \times \exp^{A+S}}{ndt}$$ with \(B\)=mortality rate, \(A\)=deviates by year, \(S\)=deviates by seasons

Examples

# NOT RUN {
{
filename = system.file("extdata", "data_fishing.csv", package="osmose")
conf = readOsmoseConfiguration(filename)
ndt = getOsmoseParameter(conf, "simulation", "time", "ndtperyear")
nyear = getOsmoseParameter(conf, "simulation", "time", "nyear")

fishing = conf$mortality$fishing

fish0 = getFishingMortality("sp0", fishing, nyear, ndt)
}
# }