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ouch (version 2.19)
Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
Description
Fit and compare Ornstein-Uhlenbeck models for evolution along a phylogenetic tree.
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Install
install.packages('ouch')
Monthly Downloads
727
Version
2.19
License
GPL-3
Maintainer
Aaron King
Last Published
April 25th, 2023
Functions in ouch (2.19)
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summary
ouch
summary methods
paint
Painting regimes on a phylogenetic tree
update
Update and refit an
ouch
model
ouchtree
Phylogenetic tree object in
ouch
format
print
Print and show methods
simulate
Simulations of a phylogenetic trait model
plot
ouch
plotting functions
ouch-package
Ornstein-Uhlenbeck methods for comparative phylogenetic hypotheses
logLik
Log likelihood of a fitted model
geospiza
Data on Darwin's finches
hansen
Ornstein-Uhlenbeck models of trait evolution
bootstrap
Bootstrapping for uncertainty quantification
bimac
Anolis bimaculatus lizard size data
brown
Phylogenetic Brownian motion models
coef
Model coefficients
as_data_frame
Coerce an
ouch
object to a data frame
anolis.ssd
Greater Antillean anolis lizard sexual size dimorphism data
glssoln
Generalized least-squares solver